PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu010321.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

bHLH

Protein Properties

Length: 235aa MW: 26305.1 Da PI: 7.9182

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu010321.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	36.7	7.5e-12	60	106	3	54
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 ++h+e+Er+RR+riNs +e+L+++l + K +Ka+ L k+ve +++L Oeu010321.1 60 ENHKEAERKRRERINSHLERLKTILLCN-----SKTDKATLLAKVVERLREL 106 68***********************8.....7***********99998 PP

Sequence ? help Back to Top
Protein Sequence Length: 235 aa Download sequence
MQPKNSPETS AFHQVPAGNC FVYGFPAMES YCSSYFYPME VRELMHAPEA EASRALTASE 60 NHKEAERKRR ERINSHLERL KTILLCNSKT DKATLLAKVV ERLRELKQQT SEIMQFDQTL 120 PSETDEITVI QNEHSSADRK SLIQASLCCE DRINLLPDLI EVLKSLHLSP LRAEIVTLGG 180 RIRNVIVMAG DKEQTDESVV LLKDALKNLV LHSSYGSGGS SKRRRILGGQ RIIG*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	66	71	ERKRRE
2	222	226	KRRRI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G41130.1	3e-60	bHLH family protein