PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu010428.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family C2H2
Protein Properties Length: 230aa    MW: 25484.7 Da    PI: 7.8815
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu010428.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H216.81.9e-05128150123
                  EEETTTTEEESSHHHHHHHHHHT CS
      zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                  +kC+ C+++F++   L  H+r+H
  Oeu010428.1 128 HKCHVCNQTFTTGQALGGHMRRH 150
                  79********************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 230 aa     Download sequence    
MAGLQTNEFD TLCSQSSKKR NHEPTEIEEE AALALLMLSQ DNRSWHTIPA TSAAAVVELI  60
KDVLNLATTA VTTTSERTAA LASSDDDKKS MEPFLLLLSL LRRTRICLRH HCTSTSNISY  120
LNPSGRIHKC HVCNQTFTTG QALGGHMRRH YEGEIKGGKK TSGITSRGGA FSQCNSNGRT  180
ITVDFNLNQP ALLETYSDFT LYIRQNFQVL GDQHKVESQI PFQKQRLDE*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G37430.15e-11C2H2 family protein