PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu010457.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family M-type_MADS
Protein Properties Length: 107aa    MW: 11979.1 Da    PI: 11.0217
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu010457.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF43.63.7e-141451138
                 S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEE CS
       SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevavi 38
                 k+i+  snrqvtfskRr  ++KK + ++vL+++eva++
  Oeu010457.1 14 KKIKKLSNRQVTFSKRRVSLFKKESKICVLTGTEVAIV 51
                 679999******************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 107 aa     Download sequence    
MEKKTQSRRK IEMKKIKKLS NRQVTFSKRR VSLFKKESKI CVLTGTEVAI VKICVLTGTE  60
VAIVVQSLTG KRVFTFGHSS VNSIIARIKN EITYDGSAKN YNKTPD*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G60440.16e-21M-type_MADS family protein