PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu010465.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family C2H2
Protein Properties Length: 224aa    MW: 24200.1 Da    PI: 8.7818
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu010465.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H216.62.2e-057193123
                 EEETTTTEEESSHHHHHHHHHHT CS
      zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                 y+C+ CgksFs+   L  H  +H
  Oeu010465.1 71 YTCGVCGKSFSSYQALGGHKTSH 93
                 9***********99998888777 PP
2zf-C2H214.50.0001122144123
                  EEETTTTEEESSHHHHHHHHHHT CS
      zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                  +kC+ C ++F++   L  H+r+H
  Oeu010465.1 122 HKCNVCYMTFTTGQALGGHMRRH 144
                  79********************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 224 aa     Download sequence    
MLSQENRSWH TGPSTSAATV EIVEEVNPAA TAVTTTSERT AALASADDEK KSREPFSPAI  60
VASPLDQNIS YTCGVCGKSF SSYQALGGHK TSHRDRSQFA TTTAITSTSN MITYRNPSGR  120
IHKCNVCYMT FTTGQALGGH MRRHYEGVIK GGKKTVAITS KGGASSQCNC NGYTSTVDFN  180
LNLLAALPET YSDFTLYSGE RIQVLIDQKK VESHIPFKKQ RLD*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G19580.24e-24C2H2 family protein