PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu010468.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

C2H2

Protein Properties

Length: 172aa MW: 18623 Da PI: 8.8601

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu010468.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	17.1	1.5e-05	19	41	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y+C+ CgksFs+ L H +H Oeu010468.1 19 YTCGVCGKSFSSYQALGGHKTSH 41 9***********99998888777 PP
2	zf-C2H2	15	7e-05	70	92	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC+ C ++F++ L H+r+H Oeu010468.1 70 HKCNVCYMTFTTGQALGGHMRRH 92 79********************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 172 aa Download sequence
MEPFPPAIIA SPQDQNISYT CGVCGKSFSS YQALGGHKTS HRDRSQFVTT TAITNTSNMI 60 PYLNPSGRIH KCNVCYMTFT TGQALGGHMR RHYEGVIKGG KKTGGITSKG GTSSQCNCNG 120 CTSTVDFNLN LLPAVPETYS DFTLYSGERL QVLSDQKKVE SHIPFKKQSL D*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G19580.2	1e-23	C2H2 family protein