PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu010472.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

C2H2

Protein Properties

Length: 224aa MW: 24050 Da PI: 8.8017

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu010472.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	16.6	2.2e-05	71	93	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y+C+ CgksFs+ L H +H Oeu010472.1 71 YTCGVCGKSFSSYQALGGHKTSH 93 9***********99998888777 PP
2	zf-C2H2	16.7	2e-05	122	144	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC+ C+++F++ L H+r+H Oeu010472.1 122 HKCNVCNMTFTTGQALGGHMRRH 144 79********************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 224 aa Download sequence
MLSQENRSWH TGPATSAATA EIVEDVNPAA TAVTTTSART AALASSDDDK KSMEPFPPAI 60 IASPQDQNIS YTCGVCGKSF SSYQALGGHK TSHRDRSQFA TTTAITNTSN MIPYLNPSGR 120 IHKCNVCNMT FTTGQALGGH MRRHYEGVIK GGKKTGLITS KGGASIQRNC NGCTSTVDFN 180 LNLLPALPET YSDFTLYSGE RIQVLSDQKK VESHIPFKKQ RLD*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G19580.2	1e-22	C2H2 family protein