PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu010545.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family M-type_MADS
Protein Properties Length: 186aa    MW: 21360.4 Da    PI: 7.2934
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu010545.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF48.31.3e-151050242
                 ---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-T CS
       SRF-TF  2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifss 42
                  i n+  r  +f kR++gi+ K +EL++LCd++ ++ii+s 
  Oeu010545.1 10 YIANDAERRASFKKRKKGIMNKMNELCTLCDIQGCIIIYSD 50
                 589************************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 186 aa     Download sequence    
MTRGKIKLEY IANDAERRAS FKKRKKGIMN KMNELCTLCD IQGCIIIYSD YEPQPTIWPS  60
PLDAQQIISR FQELPEMDQT QRLFNQESYT IQRVQKSHKQ AEKLQRINRL TDMEILMHQC  120
MAGLSSLQNS PVNDITEMGR LAEQNMQDIM ARMEELEKNR ATTLQMGGTS SSPPRDDDAG  180
PSFRN*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
12226KKRKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G48670.15e-36M-type_MADS family protein