PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu010550.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

M-type_MADS

Protein Properties

Length: 186aa MW: 21251.4 Da PI: 10.2152

Description

M-type_MADS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu010550.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SRF-TF	38.2	1.9e-12	10	49	2	41
---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE- CS SRF-TF 2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifs 41 i n+ r +f kR++gi+ K +EL++LCd++ +ii s Oeu010550.1 10 YIANDAGRRASFKKRKKGIMNKMNELCTLCDIRGRIIINS 49 589999***************************9999977 PP

Sequence ? help Back to Top
Protein Sequence Length: 186 aa Download sequence
MTRGKIKLEY IANDAGRRAS FKKRKKGIMN KMNELCTLCD IRGRIIINSA YEPQPTVWPS 60 PLDAQQIISR FRELPEMDQT QRLFNQESYT IQRVQKSHKL AEKLQRINRL TDMEILMHQR 120 MAGLSSLQNS PLNDITEMGR LAEQNMLDIV ARMEELEKNR ATTLQMGGTS SSPPRDDAAG 180 PSFRN*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	22	26	KKRKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G48670.1	7e-31	M-type_MADS family protein