PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu010772.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

RAV

Protein Properties

Length: 355aa MW: 39792.9 Da PI: 8.5786

Description

RAV family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu010772.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	42.1	2.2e-13	64	112	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s++kGV + +grW A+I++ ++r++lg+f +eeAa+a++ a+++++g Oeu010772.1 64 SRFKGVVPQP-NGRWGAQIYEK-----HQRVWLGTFSEEEEAARAYDIAAQRFRG 112 689*9788.8*****3.....5**********************998 PP
2	B3	99.8	1.6e-31	194	283	1	86
EEEE-..-HHHHTT-EE--HHH.HTT....---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-S CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh....ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldg 86 f+k+ tpsdv+k++rlv+pk++ae+h ++++ +++ l +ed g++W+++++y+++s++yvltkGW++Fv+++gLk+gD+v F+++ Oeu010772.1 194 FEKTVTPSDVGKLNRLVIPKQHAEKHfplqSENNSKGFLLNFEDMGGKVWRFRYSYWNSSQSYVLTKGWSRFVREKGLKAGDIVSFQRST 283 99*************************96667799************************************************654 PP

Sequence ? help Back to Top
Protein Sequence Length: 355 aa Download sequence
MDRNSIDIES TTSDNSMSIA PMSTLTLPVT MSLECLCRVG SGTSVIMDAE IGADTESGRK 60 LPSSRFKGVV PQPNGRWGAQ IYEKHQRVWL GTFSEEEEAA RAYDIAAQRF RGGDAVTNLK 120 PLSQTKEDEI ESIFLNAHSK AEIVDMLRKH TYSDELEQSK KRNFGGIDEN GNRAAGLFTS 180 FDADRSQRSR EQLFEKTVTP SDVGKLNRLV IPKQHAEKHF PLQSENNSKG FLLNFEDMGG 240 KVWRFRYSYW NSSQSYVLTK GWSRFVREKG LKAGDIVSFQ RSTGLDKQLY IDSKAWNGPI 300 AGISSQPVPM VRLFGVNIFE VPSNGSCYGE KRFREMDVLT LECSSKKQRV INAL*

Sequence ? help Back to Top

Protein Sequence Length: 355 aa Download sequence

MDRNSIDIES TTSDNSMSIA PMSTLTLPVT MSLECLCRVG SGTSVIMDAE IGADTESGRK  60
LPSSRFKGVV PQPNGRWGAQ IYEKHQRVWL GTFSEEEEAA RAYDIAAQRF RGGDAVTNLK  120
PLSQTKEDEI ESIFLNAHSK AEIVDMLRKH TYSDELEQSK KRNFGGIDEN GNRAAGLFTS  180
FDADRSQRSR EQLFEKTVTP SDVGKLNRLV IPKQHAEKHF PLQSENNSKG FLLNFEDMGG  240
KVWRFRYSYW NSSQSYVLTK GWSRFVREKG LKAGDIVSFQ RSTGLDKQLY IDSKAWNGPI  300
AGISSQPVPM VRLFGVNIFE VPSNGSCYGE KRFREMDVLT LECSSKKQRV INAL*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G25560.1	1e-140	RAV family protein