PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu010819.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family NF-YA
Protein Properties Length: 234aa    MW: 25968.3 Da    PI: 10.4189
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu010819.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA101.77.1e-3270126158
    CBFB_NFYA   1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 
                  d p+YVNaKQy++Il+RR+ Rakle++kkl  k+rkpylheSRh+hAl+R RgsgGrF
  Oeu010819.1  70 DGPIYVNAKQYHGILRRRKIRAKLEAQKKL-VKTRKPYLHESRHRHALNRVRGSGGRF 126
                  57****************************.**************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 234 aa     Download sequence    
MKSAVFFGNP DFSISAHSKI SQSTMPIPYA HSDSYFSGLF TAYGPHTLIQ PQMMGASSAR  60
VPLPVDLSED GPIYVNAKQY HGILRRRKIR AKLEAQKKLV KTRKPYLHES RHRHALNRVR  120
GSGGRFLSKK QPQQSDCLYP NNSQAQAQAQ AQAHQDSLHF NQIGDILNAD AREIKTNKHD  180
VPTTTCTERT RIASADVIFP LAEGRFPPHT AVSMQGGSNL EYSGNRHYAS TVR*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G54160.12e-38NF-YA family protein