PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu010863.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

MYB

Protein Properties

Length: 624aa MW: 68771.5 Da PI: 5.9727

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu010863.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	53.9	4.2e-17	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd +lv +++++G+g+W++++ g+ R+ k+c++rw +yl Oeu010863.1 14 KGPWTPEEDIILVSYIQEHGPGNWRAVPTNTGLLRCSKSCRLRWTNYL 61 79****************************99**********97 PP
2	Myb_DNA-binding	47.2	5.2e-15	67	112	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg++T+ E++ ++++ ++lG++ W++Ia++++ Rt++++k++w+++l Oeu010863.1 67 RGNFTEHEEKMIIHLQALLGNR-WAAIASYLP-QRTDNDIKNFWNTHL 112 89******************.*****.**********996 PP
3	Myb_DNA-binding	47.2	5.2e-15	361	406	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg++T+ E++ ++++ ++lG++ W++Ia++++ Rt++++k++w+++l Oeu010863.1 361 RGNFTEHEEKMIIHLQALLGNR-WAAIASYLP-QRTDNDIKNFWNTHL 406 89******************.*****.**********996 PP

Sequence ? help Back to Top
Protein Sequence Length: 624 aa Download sequence
MGRPPCCDKI GVKKGPWTPE EDIILVSYIQ EHGPGNWRAV PTNTGLLRCS KSCRLRWTNY 60 LRPGIKRGNF TEHEEKMIIH LQALLGNRWA AIASYLPQRT DNDIKNFWNT HLKKKLKKQQ 120 GNDEQNQEGS SDSQSIPKGQ WERRLQTDIH MAKQALCEAL SLDKWNTNLL DSKPFPVTLS 180 ETKPIQTSTY ASSTENIARL LQNWTKKSPN SSQAGSSQST TQTSFNNPSI GTSSSPSEGT 240 ISATTPEGFD SFMGFSSSNS DVSQSEGEPK VNAANFIPEA GTLQGESKIN LDIQMPLTLL 300 ENWLFDDASA QGGGGYIMDM SLGENADLQK CPNQCLLHLD RAQKDGIFHI LGEHKVPGIK 360 RGNFTEHEEK MIIHLQALLG NRWAAIASYL PQRTDNDIKN FWNTHLKKKL KKQQGNDEQN 420 QEGSSDSQSI PKGQWERRLQ TDIHMAKQAL CEALSLDKWN TNLLDSKPFP VTLSETKPIQ 480 TSTYASSTEN IARLLQNWTK KSPNSSQAGS SQSTTQTSFN NPSIGTSSSP SEGTISATTP 540 EGFDSFMGFN SSNSDVSQSE GEPKVNAANF IPEAGTVQGE SKINLDIQMP LTLLENWLFD 600 DASAQGGGGY IMDMSLGENA DLF*

Sequence ? help Back to Top

Protein Sequence Length: 624 aa Download sequence

MGRPPCCDKI GVKKGPWTPE EDIILVSYIQ EHGPGNWRAV PTNTGLLRCS KSCRLRWTNY  60
LRPGIKRGNF TEHEEKMIIH LQALLGNRWA AIASYLPQRT DNDIKNFWNT HLKKKLKKQQ  120
GNDEQNQEGS SDSQSIPKGQ WERRLQTDIH MAKQALCEAL SLDKWNTNLL DSKPFPVTLS  180
ETKPIQTSTY ASSTENIARL LQNWTKKSPN SSQAGSSQST TQTSFNNPSI GTSSSPSEGT  240
ISATTPEGFD SFMGFSSSNS DVSQSEGEPK VNAANFIPEA GTLQGESKIN LDIQMPLTLL  300
ENWLFDDASA QGGGGYIMDM SLGENADLQK CPNQCLLHLD RAQKDGIFHI LGEHKVPGIK  360
RGNFTEHEEK MIIHLQALLG NRWAAIASYL PQRTDNDIKN FWNTHLKKKL KKQQGNDEQN  420
QEGSSDSQSI PKGQWERRLQ TDIHMAKQAL CEALSLDKWN TNLLDSKPFP VTLSETKPIQ  480
TSTYASSTEN IARLLQNWTK KSPNSSQAGS SQSTTQTSFN NPSIGTSSSP SEGTISATTP  540
EGFDSFMGFN SSNSDVSQSE GEPKVNAANF IPEAGTVQGE SKINLDIQMP LTLLENWLFD  600
DASAQGGGGY IMDMSLGENA DLF*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G62470.2	1e-107	MYB family protein