PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu011060.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family NF-YC
Protein Properties Length: 110aa    MW: 11957.9 Da    PI: 9.7332
Description NF-YC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu011060.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YC103.31.6e-32221021998
        NF-YC  19 helPlarikkilk.adedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdflvdivpr 98 
                  h lPlarikki+k + +dvkmi+ eaP+++skacelfi e+t r+w+ + + krrtl k d+a+av  tdifdflv+ v  
  Oeu011060.1  22 HLLPLARIKKIMKkSSDDVKMITGEAPIVFSKACELFIEEITKRAWNITLQGKRRTLCKEDVASAVITTDIFDFLVNLVSD 102
                  789*********825689**********************************************************99875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 110 aa     Download sequence    
MKRPGTYSGI LSGGISGRTG PHLLPLARIK KIMKKSSDDV KMITGEAPIV FSKACELFIE  60
EITKRAWNIT LQGKRRTLCK EDVASAVITT DIFDFLVNLV SDSAKSEES*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G54830.36e-33NF-YC family protein