PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu011062.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family HSF
Protein Properties Length: 312aa    MW: 33783.9 Da    PI: 5.7801
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu011062.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind113.41.5e-35301212102
                   HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXXXX CS
  HSF_DNA-bind   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellekik 98 
                   Fl+k++++++d++ +elisw+e+g++f+v+ + efa++ LpkyFkh+nf+SFvRQLn+YgF+kv  ++         weF+++ F++g+k ll++i+
   Oeu011062.1  30 FLTKTFQLVDDPSSDELISWNEDGTAFIVWRPAEFARDFLPKYFKHNNFSSFVRQLNTYGFRKVVPDR---------WEFANECFRRGQKGLLRDIQ 117
                   9*****************************************************************99.........******************** PP

                   XXXX CS
  HSF_DNA-bind  99 rkks 102
                   r+k 
   Oeu011062.1 118 RRKI 121
                   *986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 312 aa     Download sequence    
MSPLPVKQSS DSTVGTSSGG DSQRSVPTPF LTKTFQLVDD PSSDELISWN EDGTAFIVWR  60
PAEFARDFLP KYFKHNNFSS FVRQLNTYGF RKVVPDRWEF ANECFRRGQK GLLRDIQRRK  120
ISSGAAAAAT TTIVANAQAV TAAVPLAAVA GHSPANSGDE LVLSSNSSPA ATVSPALSLQ  180
TCTTEPELLE ENERLRKENS QLSQELNKLR SLCSNVYNLL SNYVETHGDT CRVSLLEGRA  240
LTLMPEMQVR AEDNGGPKST ATAPAMEAEV EMTPKLFGAS IGVKRGRSED GLAEDQIRGG  300
CDNALQVMKV H*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G11660.11e-79HSF family protein