PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu011083.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

CO-like

Protein Properties

Length: 362aa MW: 40015 Da PI: 6.0572

Description

CO-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu011083.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	18.8	3.4e-06	2	42	3	37
zf-B_box 3 erkCpeHeekelqlfCedCqqllCedClleeHkg......H 37 e+ C+ ++e + +C++++ lC +C H+ H Oeu011083.1 2 EPLCEFCGEVSAVVYCKSDSAKLCLQCDGRVHSAnslscrH 42 689****99**************99989545555555 PP
2	zf-B_box	21.1	6.3e-07	46	84	4	38
zf-B_box 4 rkCpeHeekelqlfCedCqqllCedCllee..Hkg..Ht 38 +C++++++ ++ C ++q lCedC ++ +g H+ Oeu011083.1 46 LICDKCSSQAATVRCIEDQLSLCEDCDWNGnsCSGvdHR 84 69************************9777665445555 PP
3	CCT	62.8	1e-21	305	348	1	44
CCT 1 ReaallRYkeKrktRkFeKkirYesRKavAesRpRvKGrFvkqa 44 R++a++RY+eK+ktR F K+irY+sRKa+A++R+RvKGrFvk++ Oeu011083.1 305 RDKAKMRYNEKKKTRMFGKQIRYASRKARADTRKRVKGRFVKAE 348 899***************************************87 PP

Sequence ? help Back to Top
Protein Sequence Length: 362 aa Download sequence
MEPLCEFCGE VSAVVYCKSD SAKLCLQCDG RVHSANSLSC RHPRSLICDK CSSQAATVRC 60 IEDQLSLCED CDWNGNSCSG VDHRRLKLNF YTGCPSLAEF SKIWSSVLEA PQQTTNSFQS 120 AMATNENSNV TAPCLNDLAP CVKDQKEFFS EGSGLLKDCA NIKDLKLPET DELCDSLDID 180 DIGLSFESSY EMLGNQPRYN YEDGGIGQKD CRVFHQPSSH VAAGSRNLMQ TNCMVMNPAA 240 ACNRSSIGLG FPNCQLPSTI SLSLSNITGE SSAADYQDCG LSPMFLTGDN SRWDSNLEAS 300 CPRARDKAKM RYNEKKKTRM FGKQIRYASR KARADTRKRV KGRFVKAEEA YDYEPLMTKD 360 F*

Sequence ? help Back to Top

Protein Sequence Length: 362 aa Download sequence

MEPLCEFCGE VSAVVYCKSD SAKLCLQCDG RVHSANSLSC RHPRSLICDK CSSQAATVRC  60
IEDQLSLCED CDWNGNSCSG VDHRRLKLNF YTGCPSLAEF SKIWSSVLEA PQQTTNSFQS  120
AMATNENSNV TAPCLNDLAP CVKDQKEFFS EGSGLLKDCA NIKDLKLPET DELCDSLDID  180
DIGLSFESSY EMLGNQPRYN YEDGGIGQKD CRVFHQPSSH VAAGSRNLMQ TNCMVMNPAA  240
ACNRSSIGLG FPNCQLPSTI SLSLSNITGE SSAADYQDCG LSPMFLTGDN SRWDSNLEAS  300
CPRARDKAKM RYNEKKKTRM FGKQIRYASR KARADTRKRV KGRFVKAEEA YDYEPLMTKD  360
F*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G21880.1	9e-92	CO-like family protein