PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu011111.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

LBD

Protein Properties

Length: 157aa MW: 17556.2 Da PI: 6.7205

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu011111.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	130.7	6.1e-41	12	110	1	99
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallk 98 +CaaCk+l+r+C++ C +apyf +++++kfa vhk+FGasnv+k+l+++p+e+reda++slvyeA++r++dPvyG++gvi +lq+++ +l+++l l + Oeu011111.1 12 SCAACKLLKRRCTPTCQFAPYFQSDESNKFAKVHKVFGASNVSKILNEVPQEQREDAVNSLVYEADVRLSDPVYGCIGVIASLQKKIVELQHDLILSR 109 6******************************************************************************************9998776 PP DUF260 99 e 99 + Oeu011111.1 110 A 110 5 PP

Sequence ? help Back to Top
Protein Sequence Length: 157 aa Download sequence
MKSHRELCSG SSCAACKLLK RRCTPTCQFA PYFQSDESNK FAKVHKVFGA SNVSKILNEV 60 PQEQREDAVN SLVYEADVRL SDPVYGCIGV IASLQKKIVE LQHDLILSRA RLAYYVDQTV 120 LCLDDGANMC PVIDMVEPFK GKDCFSFDQF TQYPFP*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G11090.1	2e-58	LBD family protein