PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu011140.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family bHLH
Protein Properties Length: 132aa    MW: 14582.2 Da    PI: 9.8729
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu011140.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH26.98.4e-09851221355
                  HHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
          HLH  13 RdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 
                  R+riN+++  L+ l+P  a      K++ +++Le+Av+Y+k Lq
  Oeu011140.1  85 RERINERLRILQNLVPDgA------KVNISTMLEEAVQYVKFLQ 122
                  99***************66......******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 132 aa     Download sequence    
MQVQNNKRSI EKKRVSNLDN DEDNNNNAVI HRQSPSSYCS EDESNASHEL NGGLASSSNS  60
KGSGKARANR GLASDPQSLY ARKGRERINE RLRILQNLVP DGAKVNISTM LEEAVQYVKF  120
LQIQIKVTNI L*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G33880.15e-33bHLH family protein