PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu011142.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family LBD
Protein Properties Length: 208aa    MW: 22978 Da    PI: 7.3759
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu011142.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF26096.33.1e-302103197
       DUF260   1 aCaaCkvlrrkCakdCvlapyf.....paeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkae 93 
                  +C++C++lr++C ++C+l++ +     p++q++++ +v+k+FG++ ++++l+++pe++r+++++sl++eA+ r+ +Pv+Gavg++++++++ +ql++e
  Oeu011142.1   2 SCNGCRILRKGCHENCILRQSLqgiesPQAQANATVFVAKFFGRAGLMSFLSSVPESQRPALFQSLLFEACGRTVNPVNGAVGLLWTGNWHACQLAVE 99 
                  6***********************************************************************************************99 PP

       DUF260  94 lall 97 
                  ++l+
  Oeu011142.1 100 TVLR 103
                  8875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 208 aa     Download sequence    
MSCNGCRILR KGCHENCILR QSLQGIESPQ AQANATVFVA KFFGRAGLMS FLSSVPESQR  60
PALFQSLLFE ACGRTVNPVN GAVGLLWTGN WHACQLAVET VLRGGVLRPL PGFSQSPEFD  120
EASEASNTDL YRSQDLNLRV KRKGFDDDLN LGLTMGFPRK NRLSEERRPD SPSDESEMTT  180
LESGLLSNQG LQQNHHGQES KFLRLFF*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37540.12e-73LBD family protein