PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu011501.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family MYB
Protein Properties Length: 261aa    MW: 29481.9 Da    PI: 5.6255
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu011501.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding55.31.5e-171461148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g+W+++Ed++l+ +++q+G g+W++ ++  g+ R++k+c++rw +yl
      Oeu011501.1 14 KGPWSPQEDLILISYIQQHGHGNWRALPKQAGLLRCGKSCRLRWTNYL 61
                     79******************************99************97 PP
2Myb_DNA-binding51.52.3e-1667112148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                      rg++++eE+e +++++++ G++ W++Ia++++ gRt++++k+ w+++l
      Oeu011501.1  67 RGNFSKEEEETIIKLHEMIGNR-WSAIAARLP-GRTDNEIKNVWHTHL 112
                      89********************.*********.************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 261 aa     Download sequence    
MVRAPCCQKM GLKKGPWSPQ EDLILISYIQ QHGHGNWRAL PKQAGLLRCG KSCRLRWTNY  60
LRPDIKRGNF SKEEEETIIK LHEMIGNRWS AIAARLPGRT DNEIKNVWHT HLKKRLKNSN  120
TSEDSNRNSI IQKCDSSKAP GNPNSSSEQI VDSPQHCSSE MSSVTDSYEK TVTNHEEMDN  180
SSEYFPQIDE TFWSDDFSTD VNINMQSSNF PAAANDKVQF EFPSSPLENA AAGNLMVDDS  240
MDFWYNVFIG AGDMPDLPVF *
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23250.18e-85MYB family protein