PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu011790.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family MYB_related
Protein Properties Length: 172aa    MW: 18887.9 Da    PI: 7.4057
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu011790.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding25.72.6e-0822452246
                     T-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding 22 gtWktIartmgkgRtlkqcksrwqk 46
                     + W+ Ia++ + gRt++++k++w++
      Oeu011790.1 22 RKWSVIASHPP-GRTDNDVKNYWNS 45
                     57*********.***********96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 172 aa     Download sequence    
MNLLHRKKTI SYTLSMVSWE ARKWSVIASH PPGRTDNDVK NYWNSKLKKK PIAANYGYNP  60
TNSIDTTAAK AKTDLASSTT NTLVPTFSAQ ETSPISPCLT ESTKNPSFSS SSQQDSTISE  120
TFSQLGNDFI FGNGSCSNGI PMDNIGYRRS YEILDEIWSQ EAANEGVPNL Y*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G57620.15e-11MYB family protein