PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu011830.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

ARF

Protein Properties

Length: 1082aa MW: 119318 Da PI: 6.443

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu011830.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	67.8	1.5e-21	129	230	1	99
EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE. CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefe 91 f+k+lt sd++++g +++p++ ae++ ++++++ +l+ +d++ + W++++i+r++++r++lt+GW+ Fv+ ++L +gD+v+F ++++++ Oeu011830.1 129 FCKTLTASDTSTHGGFSVPRRAAEKIfplldftMQPPAQ--ELVARDLHENLWTFRHIFRGQPKRHLLTTGWSLFVSGKRLFAGDSVLFI--RDEKQQ 222 99***************************96555544..8********************************************..568888 PP .EEEEE-S CS B3 92 lvvkvfrk 99 l+++++r+ Oeu011830.1 223 LLLGIRRA 230 9**997 PP
2	Auxin_resp	118.5	5.4e-39	255	338	1	83
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalk.vkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 aaha++++++F+v+YnPras+seFv++++k+ ka+ +++s+GmRf+m+feteds +rr++Gt++gv dldp+rW+nS+Wr+L+ Oeu011830.1 255 AAHAVANNTPFTVFYNPRASPSEFVIPLAKYYKAVCsNQISIGMRFRMMFETEDSGTRRYMGTITGVGDLDPLRWKNSQWRNLQ 338 79****************************998669******************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 1082 aa Download sequence
MKAHGGGVQP VNPSEGEQKK SINPELWQAC AGPLVNLPAA GTHVVYFPQG HSEQVAASMR 60 KDVDGQIPNY ANLPSELVCS LHDITLQADP ETDEVYAQMT LQPVPSFDKD ALLRSELSMK 120 ANKPQTEFFC KTLTASDTST HGGFSVPRRA AEKIFPLLDF TMQPPAQELV ARDLHENLWT 180 FRHIFRGQPK RHLLTTGWSL FVSGKRLFAG DSVLFIRDEK QQLLLGIRRA NRQPTNLSSS 240 VLSSDSMHIG ILAAAAHAVA NNTPFTVFYN PRASPSEFVI PLAKYYKAVC SNQISIGMRF 300 RMMFETEDSG TRRYMGTITG VGDLDPLRWK NSQWRNLQVG WDESNAGEKR NRVSIWEIEP 360 ITAPFFICPT TPLFRSKRPR QLGMSDGDSS DLDNLIRRSM PWIGDEYGMK DPQAVHGLSL 420 VQWMNMQQNA SLANSMQPNY LNPLLGSVMQ NLSGADLSRQ LALPASLSQP NNLQFNTQRA 480 SQHVQQLDQL QKLPASTLNP LDTVIQTQQQ LMDIAESPRQ NLINQTLPTS QVQAQLLHMQ 540 SPSQALVNHQ LQRSLPQNLN QQQILSHNQQ QNFTSTQSSD HISPQLHVPE NQIQIQLLQK 600 LHQQQQSLLA QQSSMQQPSQ LTQFQDQQKQ LSDVSQNFSR SASTNQMLDA SRATSTSFPQ 660 SHVVPQQMTI SNSQTNLRFA HPPQQQKLLQ QQSGILSELP GQMGSNLNPM NNQLSTAGTI 720 NCQSVVTDEV PSCSTSPSTN NCSSAFQSIM TGRNNRSITP GDEIAESSAG LLNSSNNLEP 780 ISSSGNLIND FQQKHGVKSS LNISKSQNLG FFASQPCLNA AGTQIDYFDS SSSATSVLSQ 840 QNNSMSLNSQ SMLLRDASQD REVQGDPRNN VPLGANINHQ LGIPMMPDPL IEKGMTGSGN 900 DLSNGVTSGG DMLSSFVNPK GHQPELSSAV IAQSFGVPDM TFNSNDSTIN DSSFMNGGAW 960 APTQMPRIRT YTKVYKRGAV GRSIDITRYS GYEELKQDLA RMFGIQGQLE DQRRIGLKLV 1020 YVDHENDVLL VGDDPWEEFV NCVRCIKILS PQEVQQMSLD GDFGNGILQN QACSSSDNGV 1080 V*

Sequence ? help Back to Top

Protein Sequence Length: 1082 aa Download sequence

MKAHGGGVQP VNPSEGEQKK SINPELWQAC AGPLVNLPAA GTHVVYFPQG HSEQVAASMR  60
KDVDGQIPNY ANLPSELVCS LHDITLQADP ETDEVYAQMT LQPVPSFDKD ALLRSELSMK  120
ANKPQTEFFC KTLTASDTST HGGFSVPRRA AEKIFPLLDF TMQPPAQELV ARDLHENLWT  180
FRHIFRGQPK RHLLTTGWSL FVSGKRLFAG DSVLFIRDEK QQLLLGIRRA NRQPTNLSSS  240
VLSSDSMHIG ILAAAAHAVA NNTPFTVFYN PRASPSEFVI PLAKYYKAVC SNQISIGMRF  300
RMMFETEDSG TRRYMGTITG VGDLDPLRWK NSQWRNLQVG WDESNAGEKR NRVSIWEIEP  360
ITAPFFICPT TPLFRSKRPR QLGMSDGDSS DLDNLIRRSM PWIGDEYGMK DPQAVHGLSL  420
VQWMNMQQNA SLANSMQPNY LNPLLGSVMQ NLSGADLSRQ LALPASLSQP NNLQFNTQRA  480
SQHVQQLDQL QKLPASTLNP LDTVIQTQQQ LMDIAESPRQ NLINQTLPTS QVQAQLLHMQ  540
SPSQALVNHQ LQRSLPQNLN QQQILSHNQQ QNFTSTQSSD HISPQLHVPE NQIQIQLLQK  600
LHQQQQSLLA QQSSMQQPSQ LTQFQDQQKQ LSDVSQNFSR SASTNQMLDA SRATSTSFPQ  660
SHVVPQQMTI SNSQTNLRFA HPPQQQKLLQ QQSGILSELP GQMGSNLNPM NNQLSTAGTI  720
NCQSVVTDEV PSCSTSPSTN NCSSAFQSIM TGRNNRSITP GDEIAESSAG LLNSSNNLEP  780
ISSSGNLIND FQQKHGVKSS LNISKSQNLG FFASQPCLNA AGTQIDYFDS SSSATSVLSQ  840
QNNSMSLNSQ SMLLRDASQD REVQGDPRNN VPLGANINHQ LGIPMMPDPL IEKGMTGSGN  900
DLSNGVTSGG DMLSSFVNPK GHQPELSSAV IAQSFGVPDM TFNSNDSTIN DSSFMNGGAW  960
APTQMPRIRT YTKVYKRGAV GRSIDITRYS GYEELKQDLA RMFGIQGQLE DQRRIGLKLV  1020
YVDHENDVLL VGDDPWEEFV NCVRCIKILS PQEVQQMSLD GDFGNGILQN QACSSSDNGV  1080
V*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G19220.1	0.0	ARF family protein