PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu011871.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family MYB
Protein Properties Length: 326aa    MW: 36130.9 Da    PI: 7.603
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu011871.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding49.87.6e-161663148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     rg W++eEde+lv+ +   G g+W+ ++r  g+ R++k+c++rw +yl
      Oeu011871.1 16 RGLWSPEEDEKLVRHISANGHGCWSVVPRLAGLQRCGKSCRLRWINYL 63
                     788*******************************************97 PP
2Myb_DNA-binding49.11.3e-1569112146
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                      rg+++++E  l++d+++ lG++ W+ Ia++++ gRt++++k++w++
      Oeu011871.1  69 RGSFSAQEAALIIDLHNILGNK-WAQIAKHLP-GRTDNEVKNFWNS 112
                      899*******************.*********.***********96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 326 aa     Download sequence    
MGHGHHTCCN KQKVKRGLWS PEEDEKLVRH ISANGHGCWS VVPRLAGLQR CGKSCRLRWI  60
NYLRPDLKRG SFSAQEAALI IDLHNILGNK WAQIAKHLPG RTDNEVKNFW NSNIKKKLMS  120
RNLSNMAPVS DLPAISNMTN SRSNFHGLYS MNSNSNLIPT AQMDQVYIPA AAPNNPLPQG  180
FDQVNFNTNL HPSFPMSSLD SSAYDLLPMP LWISSEYQKP QLIDHHQQQF IKQEDTSMYI  240
TGGAAASEFI NPPPLMGTYE DTSVNNGLPK LCEIINGNQY GMSSSSTSQD FEPVSGAGFS  300
GFPSDLYAPE MQVPLVIYSQ YGGMI*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G13890.23e-74MYB family protein