PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu011875.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

MYB

Protein Properties

Length: 347aa MW: 38662.9 Da PI: 8.0705

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu011875.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	54.2	3.3e-17	16	63	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg W++eEde+l++ + +G g+W+t++r g+ R++k+c++rw +yl Oeu011875.1 16 RGLWSPEEDEKLIRHISAHGHGCWSTVPRFAGLQRCGKSCRLRWINYL 63 788*******************************************97 PP
2	Myb_DNA-binding	50.5	4.7e-16	69	111	1	45
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 rg++++eE l++d+++ lG++ W+ Ia++++ gRt++++k++w+ Oeu011875.1 69 RGSFSPEEAALIIDLHNILGNK-WAQIAKYLP-GRTDNEVKNFWN 111 899*****************.*****.*********8 PP

Sequence ? help Back to Top
Protein Sequence Length: 347 aa Download sequence
MTPGQHTCCD KQKVKRGLWS PEEDEKLIRH ISAHGHGCWS TVPRFAGLQR CGKSCRLRWI 60 NYLRPDLKRG SFSPEEAALI IDLHNILGNK WAQIAKYLPG RTDNEVKNFW NSSIKKKLMA 120 MNLYNSTRSN FQGLSSMNFN SSLVPTAQMD QVYIPPAAQN NPVPQGFDQV NFNTNLIPAL 180 TPFPISSMDS SAYNLPPSVW MTSEYHQPQL VDHQKQFIKQ EDNSMFINDG PAPQQFFNAP 240 PLMRTFVDTS VINGLPKVCD MTNGNQSGIY SSVPPVLEPV SEGFSRFPSG LYAPEMQAPA 300 VCHIQFIESL MSAFNSSSSH SQALPPLPYS GPFLLNPNQT SGWINP*

Sequence ? help Back to Top

Protein Sequence Length: 347 aa Download sequence

MTPGQHTCCD KQKVKRGLWS PEEDEKLIRH ISAHGHGCWS TVPRFAGLQR CGKSCRLRWI  60
NYLRPDLKRG SFSPEEAALI IDLHNILGNK WAQIAKYLPG RTDNEVKNFW NSSIKKKLMA  120
MNLYNSTRSN FQGLSSMNFN SSLVPTAQMD QVYIPPAAQN NPVPQGFDQV NFNTNLIPAL  180
TPFPISSMDS SAYNLPPSVW MTSEYHQPQL VDHQKQFIKQ EDNSMFINDG PAPQQFFNAP  240
PLMRTFVDTS VINGLPKVCD MTNGNQSGIY SSVPPVLEPV SEGFSRFPSG LYAPEMQAPA  300
VCHIQFIESL MSAFNSSSSH SQALPPLPYS GPFLLNPNQT SGWINP*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G13890.2	7e-74	MYB family protein