PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu011876.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

MYB

Protein Properties

Length: 254aa MW: 28102.9 Da PI: 7.6133

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu011876.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	23	1.9e-07	16	47	1	32
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg 32 rg W++eEde+l + +G g+W++++r g Oeu011876.1 16 RGLWSPEEDEKLTRHKSAYGHGCWSAVPRLAG 47 788**************************987 PP
2	Myb_DNA-binding	24.7	5.4e-08	82	104	22	45
T-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 22 gtWktIartmgkgRtlkqcksrwq 45 + W+ Ia++++ gRt+ ++k++w+ Oeu011876.1 82 RKWAQIAKHLP-GRTDDEVKNFWN 104 47*******.*********8 PP

Sequence ? help Back to Top
Protein Sequence Length: 254 aa Download sequence
MSPGQHTCCD KQKVKRGLWS PEEDEKLTRH KSAYGHGCWS AVPRLAGITF GNFNFRTHVV 60 AEMRQELQAK MDELLEAGSE KRKWAQIAKH LPGRTDDEVK NFWNSSIKKK LMATNLSHST 120 RSNFQGLSSI NFNSSLIPTA QMDQVYIPPA APNNPAPQGF GQEDTSMFIN GGPAAQQFFN 180 APPLMRNYVD TSVINGLPKV YEMTNGNQFG MHSSVPPVPE PVSESFSGFP SGLYVPEMQV 240 PAVCHIQFIE SLM*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G13890.2	1e-38	MYB family protein