PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu011889.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

LBD

Protein Properties

Length: 254aa MW: 28865.2 Da PI: 6.2198

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu011889.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	128.8	2.4e-40	20	117	1	98
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallk 98 aCaaCk++rrkCa+dC+lapyfp+e++++f n+hklFG+sn++k++++l+++ ++dam+++++++++ra+dPv G++++i++l++q++ +kael+ + Oeu011889.1 20 ACAACKYQRRKCAPDCILAPYFPHERHRQFLNAHKLFGVSNIIKIIRHLDQQSKDDAMRTIIFQSDVRASDPVGGCYRIIRSLERQINVAKAELEIIL 117 7********************************************************************************************99765 PP

Sequence ? help Back to Top
Protein Sequence Length: 254 aa Download sequence
MTNNNNHTIQ HSRSHATAQA CAACKYQRRK CAPDCILAPY FPHERHRQFL NAHKLFGVSN 60 IIKIIRHLDQ QSKDDAMRTI IFQSDVRASD PVGGCYRIIR SLERQINVAK AELEIILHHL 120 ALCRAQAVVA QQQAALQAVD DTDSTLNCDV INGDPLGSYD ESMNNYHHNL HVQPPQQHRH 180 DQYIDQEQIA LQEINAWGIN AQESTSSSFP IHRRAVVDEC DDFRPILDLP DEREEFKFDP 240 ADENGEPRFV TLA*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G13850.1	6e-55	LBD family protein