PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu011943.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

Trihelix

Protein Properties

Length: 619aa MW: 68684.8 Da PI: 5.9907

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu011943.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	96.7	2.1e-30	69	153	1	87
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87 rW++qe++aLi++r++m ++r+++lk+plWe+vs+km+e gfer++k+Ckek+enl k++k++keg+ + ++ +t+++fdqlea Oeu011943.1 69 RWPRQETMALIKIRSDMAVAFRDSSLKGPLWEDVSRKMAELGFERTAKKCKEKFENLYKYHKRTKEGRAAK--PDGKTYRFFDQLEA 153 8******************************************************************85..77789*****85 PP
2	trihelix	106.9	1.3e-33	436	521	1	87
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87 rW+k ev+aLi++r++++ +++++ k+plWee+s++m++ g++r+pk+Ckekwen+nk++kk+ke++kkr +e+s+tcpyf+ql+a Oeu011943.1 436 RWPKAEVQALIDLRTSLDLKYQENGPKGPLWEEISAAMAKLGYNRNPKRCKEKWENINKYFKKVKESNKKR-PEDSKTCPYFHQLDA 521 8*******************************************************************8.99*********85 PP

Sequence ? help Back to Top
Protein Sequence Length: 619 aa Download sequence
MMLGVSGIMN SSGEGGGAAP QGHQSGGASA GSSEVGGGAT SIPGGFSEED KAAAAARMEE 60 NERSVGGNRW PRQETMALIK IRSDMAVAFR DSSLKGPLWE DVSRKMAELG FERTAKKCKE 120 KFENLYKYHK RTKEGRAAKP DGKTYRFFDQ LEALESNAPQ PVLGRPQPQP LSMVAPPPLS 180 GNTNLPMLAV SISSPNPVNV AQNPAAAAAA AQSANNSTLF QPLLPPPTMN TTTTTSTYPP 240 QSHTFQPSNL VFSNSSSSTS SDEDIQRRRG RKRKWKDFFE RLMKDVIDKQ EELQKKFLET 300 LEKRERDRMA KEEAWRVQEM TRLNREHDLL VQERSIAAAK DAAVIQFLQK ITEQQNLQIP 360 ISNANAPQMP MPMPMQVQVP ENPPPPQQTT APPPPPPTRP PAPTLAPVVE TPTKVLDTPT 420 IDNNGGENFI PASSSRWPKA EVQALIDLRT SLDLKYQENG PKGPLWEEIS AAMAKLGYNR 480 NPKRCKEKWE NINKYFKKVK ESNKKRPEDS KTCPYFHQLD ALYRERTKTD ASSNPGFIMK 540 PDQNPMMPIM ARPEQQWPLP QSQYLHQHQD SAPDDHGSEN VDENDDDEGE DDDEDEGGNY 600 EIVTNKQQSS TTNTNTVE*

Sequence ? help Back to Top

Protein Sequence Length: 619 aa Download sequence

MMLGVSGIMN SSGEGGGAAP QGHQSGGASA GSSEVGGGAT SIPGGFSEED KAAAAARMEE  60
NERSVGGNRW PRQETMALIK IRSDMAVAFR DSSLKGPLWE DVSRKMAELG FERTAKKCKE  120
KFENLYKYHK RTKEGRAAKP DGKTYRFFDQ LEALESNAPQ PVLGRPQPQP LSMVAPPPLS  180
GNTNLPMLAV SISSPNPVNV AQNPAAAAAA AQSANNSTLF QPLLPPPTMN TTTTTSTYPP  240
QSHTFQPSNL VFSNSSSSTS SDEDIQRRRG RKRKWKDFFE RLMKDVIDKQ EELQKKFLET  300
LEKRERDRMA KEEAWRVQEM TRLNREHDLL VQERSIAAAK DAAVIQFLQK ITEQQNLQIP  360
ISNANAPQMP MPMPMQVQVP ENPPPPQQTT APPPPPPTRP PAPTLAPVVE TPTKVLDTPT  420
IDNNGGENFI PASSSRWPKA EVQALIDLRT SLDLKYQENG PKGPLWEEIS AAMAKLGYNR  480
NPKRCKEKWE NINKYFKKVK ESNKKRPEDS KTCPYFHQLD ALYRERTKTD ASSNPGFIMK  540
PDQNPMMPIM ARPEQQWPLP QSQYLHQHQD SAPDDHGSEN VDENDDDEGE DDDEDEGGNY  600
EIVTNKQQSS TTNTNTVE*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	268	274	RRGRKRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G76890.2	1e-80	Trihelix family protein