PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu011973.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family GRAS
Protein Properties Length: 700aa    MW: 78061.1 Da    PI: 5.545
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu011973.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS437.97.5e-1343346981374
         GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetsekn..sseelaalklfsevsPilkfshl 96 
                  lv+lLl+cAeavs+++  la+++L  l+  +sp gd+mqR+aa+fteAL+ rla+  ++  ++ +p++ ++    s+e l++++++++++P++kf+h+
  Oeu011973.1 334 LVHLLLACAEAVSKEEYMLARRYLHILNRVVSPLGDSMQRVAACFTEALSGRLASILTNKPSTSNPKPFNPFPpnSVEILKIYQILYQACPYIKFAHF 431
                  68*****************************************************76666666666655543344*********************** PP

         GRAS  97 taNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledleleeL 194
                  taNqaI ea+e eervH+iD+di qG QWpa++qaLa+Rp+g+p lRiTgvg+    + e+++etg+ L+++A++l+vpfef++ v ++ledl+++++
  Oeu011973.1 432 TANQAIFEAFEAEERVHVIDLDILQGYQWPAFIQALAARPGGAPFLRITGVGH----DPEAVRETGRCLTELAHSLHVPFEFHP-VGEQLEDLRPHMF 524
                  *****************************************************....***************************.7************ PP

         GRAS 195 rvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgr 292
                  + + gEalaVn+v +lhr++   ++l +    +L l+++  P++v++veqea+hn++ Fl rfleal++ysa+fdsl+a++p++s +r+kvE++++++
  Oeu011973.1 525 NRRVGEALAVNSVNRLHRVP--GHALGN----LLALIRDQAPNIVTIVEQEASHNGPYFLGRFLEALHCYSAIFDSLDATFPPDSLQRAKVEQHIFAP 616
                  *******************9..566666....****************************************************************** PP

         GRAS 293 eivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                  ei n+vaceg er++rhe+lekWr+ +e  GF+ vplse+a++q k ll  ++ dgyr+ e++gsl+lgW+dr+++++SaWr
  Oeu011973.1 617 EIWNIVACEGPERVMRHERLEKWRKLMEGKGFEGVPLSENAVTQSKILLGLYSCDGYRLTEDKGSLLLGWQDRAILAASAWR 698
                  *********************************************************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 700 aa     Download sequence    
MGSLNTETGN SIKTEMGNLK VSVGSLKSDK SYTTQEPISP NESVSELKKN SSLSDFETPR  60
TSLTSLTPTS LSIPELKFEV DGDVEIQSPD FSMWDSIFSD QLEGDFMISS PVRNINSPQA  120
TKFHNVNSNY AHAIHGSSLM GWSPPRVPSP LGPQSASLQK GKGLSPLHRV FNSPNNQFMQ  180
VENFSLPALE SLLEDNIYEK DDDFVVFSPM KITEGETSSD CFDALTSVPE LLDCLTLPNS  240
TRFCGSVVND TTVHGCNDIY QAGSIPPVQL SQQLREERQH EEHQRQQQEH ALPSQRTQRQ  300
LHQQQQQNQL QNLHNFVVPI SIGPEQEQDS GLQLVHLLLA CAEAVSKEEY MLARRYLHIL  360
NRVVSPLGDS MQRVAACFTE ALSGRLASIL TNKPSTSNPK PFNPFPPNSV EILKIYQILY  420
QACPYIKFAH FTANQAIFEA FEAEERVHVI DLDILQGYQW PAFIQALAAR PGGAPFLRIT  480
GVGHDPEAVR ETGRCLTELA HSLHVPFEFH PVGEQLEDLR PHMFNRRVGE ALAVNSVNRL  540
HRVPGHALGN LLALIRDQAP NIVTIVEQEA SHNGPYFLGR FLEALHCYSA IFDSLDATFP  600
PDSLQRAKVE QHIFAPEIWN IVACEGPERV MRHERLEKWR KLMEGKGFEG VPLSENAVTQ  660
SKILLGLYSC DGYRLTEDKG SLLLGWQDRA ILAASAWRC*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G66350.12e-94GRAS family protein