PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu011975.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

GRF

Protein Properties

Length: 491aa MW: 53589.3 Da PI: 6.7953

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu011975.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	74.2	1.4e-23	178	221	1	44
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkske 44 d+ep+rCrRtDGKkWRCs+++++++k+CErH++r r+rsrk++e Oeu011975.1 178 DPEPWRCRRTDGKKWRCSKDAVPDQKYCERHINRCRNRSRKPVE 221 79***************************************998 PP
2	QLQ	48.2	3.3e-17	112	146	1	35
QLQ 1 saFTaaQlqlLksQilAyKyLaanqPvPpeLlqai 35 ++FT++Q+++L++Q+l+y +++a++P+P++L++++ Oeu011975.1 112 GPFTPSQWMELEQQLLIYTHILAHVPIPSNLIMPL 146 59******************************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 491 aa Download sequence
MDFGVITLQE PSPNPDSSEP DNSNSHGSVN LKQERSEIAE DTGKESKIAR NGSFTAFGRF 60 GLWPSGSDDG QKMLSFSSAD LHPNEGNITK YYSRTGGQLN EGMHGSLARF QGPFTPSQWM 120 ELEQQLLIYT HILAHVPIPS NLIMPLLRSL YPYATSGSYA SNVLGWGPLH LGLSSSKDPE 180 PWRCRRTDGK KWRCSKDAVP DQKYCERHIN RCRNRSRKPV EGLKGHAVSG STTSNVAPIA 240 SSSSASVISR SSLSNNLGSM LNQLNPCETH TAQASIIYPA SSDKNVYGRT QEYQSLTSTP 300 TTINLKPKDT SLSFQNQHAP FEEFAHLEFG TNSDSRVNPS TKFSYLNARN PNSFLDLESN 360 DHHLVSHFND LTDQSDHTSV SWAKKQKSDW TQLSMSIPVA PSDFSPSTDF SPQTKPTFLP 420 LRLSPEPDPV QMSLGINSNI GESNQKQSTW LPVSWGISMG GPLGEVLTST STNAGVGSSS 480 TVLNLMTEAG *

Sequence ? help Back to Top

Protein Sequence Length: 491 aa Download sequence

MDFGVITLQE PSPNPDSSEP DNSNSHGSVN LKQERSEIAE DTGKESKIAR NGSFTAFGRF  60
GLWPSGSDDG QKMLSFSSAD LHPNEGNITK YYSRTGGQLN EGMHGSLARF QGPFTPSQWM  120
ELEQQLLIYT HILAHVPIPS NLIMPLLRSL YPYATSGSYA SNVLGWGPLH LGLSSSKDPE  180
PWRCRRTDGK KWRCSKDAVP DQKYCERHIN RCRNRSRKPV EGLKGHAVSG STTSNVAPIA  240
SSSSASVISR SSLSNNLGSM LNQLNPCETH TAQASIIYPA SSDKNVYGRT QEYQSLTSTP  300
TTINLKPKDT SLSFQNQHAP FEEFAHLEFG TNSDSRVNPS TKFSYLNARN PNSFLDLESN  360
DHHLVSHFND LTDQSDHTSV SWAKKQKSDW TQLSMSIPVA PSDFSPSTDF SPQTKPTFLP  420
LRLSPEPDPV QMSLGINSNI GESNQKQSTW LPVSWGISMG GPLGEVLTST STNAGVGSSS  480
TVLNLMTEAG *

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G22840.1	8e-76	GRF family protein