PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu012089.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

bHLH

Protein Properties

Length: 190aa MW: 20865 Da PI: 8.2198

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu012089.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	42.7	1e-13	2	50	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h + Er+RR+++N+ ++ Lr l+P + + +K + a+i+ A++Y+k+L+ Oeu012089.1 2 THIATERNRRKQMNDYLSVLRALMPDS---YVQKGDQASIVGGAINYVKELE 50 89***********************...9****************996 PP

Sequence ? help Back to Top
Protein Sequence Length: 190 aa Download sequence
MTHIATERNR RKQMNDYLSV LRALMPDSYV QKGDQASIVG GAINYVKELE QQLQLMGGLK 60 KYSKENLETE TSSSSSSSPS HPFGEFFTCP QYSTTAMAMA MADGMEIAKA DIEVTMVESH 120 ANVKIRSKKH PKRLLKIVSG LQNLRLTILH LNVTTVNQVV LYSLSVKVED GCNLTSVDEI 180 AAAVNQLLS*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G72210.1	1e-65	bHLH family protein