PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu012161.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family HD-ZIP
Protein Properties Length: 158aa    MW: 18028.3 Da    PI: 7.8506
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu012161.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox54.71.7e-171063457
                 -SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS
     Homeobox  4 RttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57
                 + ++t++ql  Le+ F+ +++++  ++ +LA +lg++ rqV +W+qNrRa++k+
  Oeu012161.1 10 KKRLTPNQLMLLETNFNFDSKLDPGRKSQLALQLGVPPRQVATWYQNRRARDKN 63
                 4569***********************************************995 PP
2HD-ZIP_I/II96.33e-319100293
  HD-ZIP_I/II   2 kkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93 
                  +k+rl+ +q+ lLE++F+ ++kL+p rK++la +Lg+ prqva W+qnrRAR k++ lE d++ L+ +++++ ++n++L++ev++L++el++
  Oeu012161.1   9 RKKRLTPNQLMLLETNFNFDSKLDPGRKSQLALQLGVPPRQVATWYQNRRARDKNQSLEIDHKILQLRLENILSHNAKLQEEVARLKDELNK 100
                  8***************************************************************************************9986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 158 aa     Download sequence    
MDSFRSQTRK KRLTPNQLML LETNFNFDSK LDPGRKSQLA LQLGVPPRQV ATWYQNRRAR  60
DKNQSLEIDH KILQLRLENI LSHNAKLQEE VARLKDELNK VQEMLQTFNS SISSSSDEVG  120
STNLIHSSKN HLDMEPYASF IRDAGQFGPI EGDDLFA*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G53980.16e-28HD-ZIP family protein