PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu012163.4

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

ARF

Protein Properties

Length: 624aa MW: 69815.1 Da PI: 9.4936

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu012163.4	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	59.5	5.8e-19	102	186	12	99
HTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS B3 12 ksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 + ++lp ++++++++ + s++l+ +d++g +W++++iyr++++r++lt+GW+ F + ++L +gD v+F + ++el+++++r+ Oeu012163.4 102 MNFGIYLPMLCLNDYKQQRP-SQELVAKDLHGIEWKFRHIYRGQPRRHLLTTGWSAFINKKKLVSGDAVLFIR--GGDGELRLGIRRA 186 56778999999999976654.569**********************************************3..378999**997 PP
2	Auxin_resp	104	1.8e-34	212	290	2	82
Auxin_resp 2 ahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsL 82 +a+st+++F+++Y+Pra++se +v+++k+ k+ + +s+GmRfkm++eted+ser+ G++vgvs++dpvrWp+SkWr+L Oeu012163.4 212 LNAISTRTIFNICYSPRAGSSEIIVPCHKFTKSAGRYFSAGMRFKMRVETEDASERS--GLIVGVSEVDPVRWPGSKWRCL 290 689***************************************************9..*******************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 624 aa Download sequence
MTFLRKLYDF GQIEKKWRDR EVEAETEDED TEGARTSIIP HMFCKTLTAS DTSTHGGFSV 60 PRRAAEDCFP PLDYKQQRPS QELVAKDLHG IEWKFRHIYR GMNFGIYLPM LCLNDYKQQR 120 PSQELVAKDL HGIEWKFRHI YRGQPRRHLL TTGWSAFINK KKLVSGDAVL FIRGGDGELR 180 LGIRRASQIK SGASIPAFLA QQFSASGIAS VLNAISTRTI FNICYSPRAG SSEIIVPCHK 240 FTKSAGRYFS AGMRFKMRVE TEDASERSGL IVGVSEVDPV RWPGSKWRCL LVRYDDLQVN 300 RLHRVSPWEI EPSGSVSAPG GFVVPGAKRI RVGFPVTKPD FPVLKDGNEV SDFGEPLRFQ 360 KVLQGQEILG FRTPYAEVDS RSQHPSAMRC FPGNNGSRIS AVGNSSRHLQ ADSENSFRGD 420 FFQFHKVLQG QEAISRGPTA NKVHENGVSN VLNGFQLPTH GNSWSNLTHT HMHPSAALIQ 480 ASSPSSVLLC QQASSPPPRF QALHSGNQKN LETRDRDKFY ISEQFARKLT SCSSSESNNN 540 FVSMCKSSCR LFGFPLKEGY VATRMGSRPT ESACSYSHEN TFLARNEEQL YPKPPLATKI 600 IGNSCTKGSD MHAVRELLLD IEL*

Sequence ? help Back to Top

Protein Sequence Length: 624 aa Download sequence

MTFLRKLYDF GQIEKKWRDR EVEAETEDED TEGARTSIIP HMFCKTLTAS DTSTHGGFSV  60
PRRAAEDCFP PLDYKQQRPS QELVAKDLHG IEWKFRHIYR GMNFGIYLPM LCLNDYKQQR  120
PSQELVAKDL HGIEWKFRHI YRGQPRRHLL TTGWSAFINK KKLVSGDAVL FIRGGDGELR  180
LGIRRASQIK SGASIPAFLA QQFSASGIAS VLNAISTRTI FNICYSPRAG SSEIIVPCHK  240
FTKSAGRYFS AGMRFKMRVE TEDASERSGL IVGVSEVDPV RWPGSKWRCL LVRYDDLQVN  300
RLHRVSPWEI EPSGSVSAPG GFVVPGAKRI RVGFPVTKPD FPVLKDGNEV SDFGEPLRFQ  360
KVLQGQEILG FRTPYAEVDS RSQHPSAMRC FPGNNGSRIS AVGNSSRHLQ ADSENSFRGD  420
FFQFHKVLQG QEAISRGPTA NKVHENGVSN VLNGFQLPTH GNSWSNLTHT HMHPSAALIQ  480
ASSPSSVLLC QQASSPPPRF QALHSGNQKN LETRDRDKFY ISEQFARKLT SCSSSESNNN  540
FVSMCKSSCR LFGFPLKEGY VATRMGSRPT ESACSYSHEN TFLARNEEQL YPKPPLATKI  600
IGNSCTKGSD MHAVRELLLD IEL*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G33860.1	1e-130	ARF family protein