PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu012352.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

DBB

Protein Properties

Length: 211aa MW: 22910.7 Da PI: 5.5384

Description

DBB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu012352.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	20.2	1.3e-06	4	44	5	39
zf-B_box 5 kCpeHeekelqlfCedCqqllCedClleeHkg......Htv 39 +C+ + e++ + +C+++ lC +C + H+ H++ Oeu012352.1 4 VCDFCAEQRSTVYCRSDAASLCLSCDHNVHSAnalsrrHSR 44 6*****************************65677777765 PP
2	zf-B_box	24.7	4.7e-08	46	87	4	39
zf-B_box 4 rkCpeHeekelqlfCedCqqllCedClleeHkg......Htv 39 +C++++ +++ C d ++ lC++C + H+g H++ Oeu012352.1 46 LVCERCNTQPAYVRCIDERVSLCQNCDWTAHSGsdtspaHKR 87 68*****************************88888888876 PP

Sequence ? help Back to Top
Protein Sequence Length: 211 aa Download sequence
MGYVCDFCAE QRSTVYCRSD AASLCLSCDH NVHSANALSR RHSRTLVCER CNTQPAYVRC 60 IDERVSLCQN CDWTAHSGSD TSPAHKRLMV NSYSGCPSAA ELSAIWSFLL DSPSVGDSTC 120 EQGMGSMSIT DNRLMDCEGS QKKNDIQDAS VVLEASGLNN MDANKSTVWM GSQVPLFDPN 180 LHKPEQTAGS SNPALPMVAN YSITFCFQKL *

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G48250.1	6e-66	CO-like family protein