PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu012447.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family WOX
Protein Properties Length: 113aa    MW: 13167.4 Da    PI: 9.6575
Description WOX family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu012447.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox53.44.4e-17363257
                 T--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
     Homeobox  2 rkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57
                 ++ +t+t+ q ++Le+ F++ n++p+++++ ++ ++l    ++++ +V++WF+NrRa+ +k
  Oeu012447.1  3 KQYWTPTSVQFQVLESIFNQeNKTPNKSRIMQIVSELslhgQISDMNVYNWFKNRRARLRK 63
                 789****************99*************************************997 PP
2Wus_type_Homeobox79.54.5e-26363363
  Wus_type_Homeobox  3 rtRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerq 63
                       ++ WtPt+ Q ++Le+++++  +tPnk++i +i +eL+ +G+i+d NV++WF+Nr+aR r+
        Oeu012447.1  3 KQYWTPTSVQFQVLESIFNQENKTPNKSRIMQIVSELSLHGQISDMNVYNWFKNRRARLRK 63
                       578*******************************************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 113 aa     Download sequence    
MGKQYWTPTS VQFQVLESIF NQENKTPNKS RIMQIVSELS LHGQISDMNV YNWFKNRRAR  60
LRKLDPSIQV CDSELVIQPM VQKDKLSKRH IGTICCLNVI SCWFNVFYVI LT*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
15763RRARLRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G20700.19e-25WOX family protein