PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu012476.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family C2H2
Protein Properties Length: 257aa    MW: 28474.3 Da    PI: 7.7567
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu012476.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H213.90.000167597123
                 EEETTTTEEESSHHHHHHHHHHT CS
      zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                 ++C+ C++ Fs++  L  H++ H
  Oeu012476.1 75 FTCSFCKREFSTSQALGGHQNAH 97
                 89******************988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 257 aa     Download sequence    
MKEKIEEGSD SKPELTSRVE LDLKLAANDE MSNKNNGAAA SNLELNLFNS LNSVSSPASE  60
SSNDGSKCRF QTKTFTCSFC KREFSTSQAL GGHQNAHKQE RALAKRRHGV VEEAAAATPF  120
GHYPAYSYHP YTFPQVPFYG SFNRSSLGVR PNSMIHKQSY NPYGIRFGHE NISRAFFMNP  180
NLKGLSYNQI SGRFGHEKFE GRGSILDLGD KHVDLDHHNS STSKGNEDNN QRLRLGNVNG  240
DHQTDDESGL DLNLKL*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G10970.16e-25C2H2 family protein