PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu012558.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family bHLH
Protein Properties Length: 251aa    MW: 27920.6 Da    PI: 6.9788
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu012558.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH30.37.3e-101661154
                 CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
          HLH  1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
                 r++ +  rEr RRd++N+ f+eL  ++ k+        +Ka+iL+ A++ +k+L
  Oeu012558.1 16 RKVQKADRERLRRDKLNEQFQELGNIVAKN--------DKASILTDAIQVLKDL 61
                 5677889********************998........8*************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 251 aa     Download sequence    
MSSQRGQYAD DAISPRKVQK ADRERLRRDK LNEQFQELGN IVAKNDKASI LTDAIQVLKD  60
LTSEVSKLKT EHTVLHEESL ELTQEKNDLR EEKASLKSDV ENLNAQYEQA LRFMIPWGAV  120
NPSITMAPPF SYPVGPLPFP PGPIPMHPTI PPFPNPNPIL SYIPYPTPVV PLLDHPTTLN  180
ASTSFISSRQ DSISRISDQY RSSTSQKAVN SNNVVTDLEL KIPGSTVQKE VSSGEKNGKQ  240
PMSDEKKLYK *
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G19860.11e-50bHLH family protein