PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu012598.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family GATA
Protein Properties Length: 222aa    MW: 24208 Da    PI: 7.1525
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu012598.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA63.82e-20116150135
         GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
                  C+nC tt+TplWR+gp+g+k+LCnaCG++++k+++
  Oeu012598.1 116 CANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEER 150
                  ********************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 222 aa     Download sequence    
MMHRCNVGSC SCGLFHSQND SFSTPNSYGF DEGGDMDMYS HSYSYSGDMY SSSSSSVDCT  60
LSLGTPSTRG SNENEKRRSN FGWNMAAPSS SANRNHRGGS NSNANSGGDP LLARRCANCD  120
TTSTPLWRNG PRGPKSLCNA CGIRFKKEER RATAASNNGG GEHRVTDGSR IHHNSQTQRT  180
PCFSSSYSNE FNFVEDDDSD SFLSWRCNVT DSSSLFHDFT R*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G36620.11e-43GATA family protein