PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu012601.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family NF-YC
Protein Properties Length: 88aa    MW: 10119.8 Da    PI: 8.2294
Description NF-YC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu012601.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YC85.65.3e-271703099
        NF-YC 30 lkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdflvdivprd 99
                 +k+d++vkmis+++P+l++kace+fil+ltlr+w++ae+n+r++l++ d+++a+   +   fl  iv  d
  Oeu012601.1  1 MKSDKNVKMISTDTPILFAKACEIFILDLTLRAWMNAEDNSRQSLRRRDVFTAIMGEELLSFLAKIVSSD 70
                 9***************************************************************999887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 88 aa     Download sequence    
MKSDKNVKMI STDTPILFAK ACEIFILDLT LRAWMNAEDN SRQSLRRRDV FTAIMGEELL  60
SFLAKIVSSD RYHVCPFLIT MFSIYNH*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G48590.15e-23NF-YC family protein