PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu012603.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

HD-ZIP

Protein Properties

Length: 250aa MW: 28037.6 Da PI: 7.3936

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu012603.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	58.4	1.2e-18	104	158	2	56
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 rk+ +++k q Lee F+++++++ ++++eLAk+l+L rqV vWFqNrRa+ k Oeu012603.1 104 RKKLRLSKAQSALLEESFKQHSTLNPKHKQELAKELKLRPRQVEVWFQNRRARTK 158 677889***********************************************98 PP
2	HD-ZIP_I/II	119.6	1.6e-38	104	191	1	88
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLr 88 +kk+rlsk q++lLEesF+++++L+p++K+ela+eL+l+prqv+vWFqnrRARtk+kq+E+d+e+Lk+++++l+een+rL+ke ++L+ Oeu012603.1 104 RKKLRLSKAQSALLEESFKQHSTLNPKHKQELAKELKLRPRQVEVWFQNRRARTKLKQTEVDCEQLKKCFETLTEENRRLQKELQQLK 191 69*************************************************************************************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 250 aa Download sequence
MGFDDIHNPG LVLGLGLPSE PDRRPYLKLD DQFEKGSEPS LTLTLSADQS VDHVNLQPQD 60 SGGVSSPCNG NLKRERKVAC EEEERERMAS RVCTYEDDDG SNGRKKLRLS KAQSALLEES 120 FKQHSTLNPK HKQELAKELK LRPRQVEVWF QNRRARTKLK QTEVDCEQLK KCFETLTEEN 180 RRLQKELQQL KSLNFPPPLY MQLPAATLSM CPSCERVGGA TTGPTADVDD NGSKSKPHFY 240 NLLTNPSAA*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	153	161	RRARTKLKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37790.1	3e-75	HD-ZIP family protein