PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu012843.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

bHLH

Protein Properties

Length: 560aa MW: 60608.4 Da PI: 5.4996

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu012843.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	36	1.2e-11	371	413	7	54
HHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS HLH 7 erErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 ++ErrRR+++N+++ Lr+++Pk + K++ a+iL A+eY+k+L Oeu012843.1 371 MAERRRRKKLNDRLYLLRSVVPKiS------KMDRASILGDAIEYLKEL 413 79*******************66......**************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 560 aa Download sequence
MLSRTNSMQW MDGNKEVEET NSWTQNNNSG GLENKDDTEF GALSSFKSML EAENEADWYM 60 SATAATSHEI NMHGGSHHDL GNISFSPNFT DADNNQLVLQ SVDSSASCSP TSASVLNSLD 120 PSHQLNYFLP QKSTLMNPIH NNLLEGTFDL GRDNGFLESA LNRGTGMMNS AFNDLSTQSQ 180 MGALNLSSNP QFSSANLLQL PQTSGGFGAL GFGDGSMNGS PLFFNRSKML KPLDDFASVG 240 AQPTLFQKRA ALRKNLASGS VSSLGALNLG GEINHSRSST SLEGYDKKGE LSDVNERKRK 300 NSSGDDGEDF SIDGSNLNYD SDDQFLENST VNKMDETGKN GGNSSNANST VTGSGGDHKG 360 KKKGLPAKNL MAERRRRKKL NDRLYLLRSV VPKISKMDRA SILGDAIEYL KELLQKINDL 420 QNELESTPSS SSLSPLSNFY PLTPTTPGIP CRIKEELCPS AFASPLSSPT GQPTRVEVRL 480 REGRAVNIHM FCGRRPGLLL STMRALDNLG LDVQQAVISC FNGFALDIFR AEQCKEGQDL 540 HPDQIKAVLL DSAGFHGMV*

Sequence ? help Back to Top

Protein Sequence Length: 560 aa Download sequence

MLSRTNSMQW MDGNKEVEET NSWTQNNNSG GLENKDDTEF GALSSFKSML EAENEADWYM  60
SATAATSHEI NMHGGSHHDL GNISFSPNFT DADNNQLVLQ SVDSSASCSP TSASVLNSLD  120
PSHQLNYFLP QKSTLMNPIH NNLLEGTFDL GRDNGFLESA LNRGTGMMNS AFNDLSTQSQ  180
MGALNLSSNP QFSSANLLQL PQTSGGFGAL GFGDGSMNGS PLFFNRSKML KPLDDFASVG  240
AQPTLFQKRA ALRKNLASGS VSSLGALNLG GEINHSRSST SLEGYDKKGE LSDVNERKRK  300
NSSGDDGEDF SIDGSNLNYD SDDQFLENST VNKMDETGKN GGNSSNANST VTGSGGDHKG  360
KKKGLPAKNL MAERRRRKKL NDRLYLLRSV VPKISKMDRA SILGDAIEYL KELLQKINDL  420
QNELESTPSS SSLSPLSNFY PLTPTTPGIP CRIKEELCPS AFASPLSSPT GQPTRVEVRL  480
REGRAVNIHM FCGRRPGLLL STMRALDNLG LDVQQAVISC FNGFALDIFR AEQCKEGQDL  540
HPDQIKAVLL DSAGFHGMV*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	361	379	KKKGLPAKNLMAERRRRKK
2	373	380	ERRRRKKL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G26744.1	1e-117	bHLH family protein