PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu012999.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

MYB

Protein Properties

Length: 430aa MW: 46623.4 Da PI: 4.7474

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu012999.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	58	2.2e-18	49	94	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg+W++eEd +l ++v ++G ++W+ Iar m+ gR++k+c++rw + Oeu012999.1 49 RGPWSPEEDVILSRLVSKFGARNWSMIARGMP-GRSGKSCRLRWCNQ 94 89****************************.*********985 PP
2	Myb_DNA-binding	52.5	1.1e-16	101	145	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 r+++T eEd +++ a++ +G++ W++Ia+ ++ gRt++ +k++w++ Oeu012999.1 101 RKPFTDEEDRIILAAHAVHGNK-WASIAKLLP-GRTDNGIKNHWNST 145 789*****************.*****.*********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 430 aa Download sequence
MEGETEQQPS ETEKLTDPLV EGIAVDVISV DDEGEEREST GGGGMGRVRG PWSPEEDVIL 60 SRLVSKFGAR NWSMIARGMP GRSGKSCRLR WCNQLDPCVK RKPFTDEEDR IILAAHAVHG 120 NKWASIAKLL PGRTDNGIKN HWNSTLRRKS VNISGLKPAS SEETLLGGDM KSFKSSEGLD 180 VTMVANQPWQ SEDEVQATRN CCAPKQYLSS DSVTIDPSAG KNLPVVYPCA EENCPVVYTS 240 AEENNPMISC PAVKVGAFNV CNPSHNSAFS RAIPMQGPLI QASKPDFGIC KFLNGACGES 300 IIPMHCGRGC CAASSGVSSM SSLLGPEFLE YEEISPFPSQ ELSAIAMDLN NIAWIRSGLE 360 NAGRLSESAS HQRVPKGPST SMNSFEQNNE NDQFWFEEPN PFTTVTKDIV SQQMTMPTIA 420 LRAEVEGLS*

Sequence ? help Back to Top

Protein Sequence Length: 430 aa Download sequence

MEGETEQQPS ETEKLTDPLV EGIAVDVISV DDEGEEREST GGGGMGRVRG PWSPEEDVIL  60
SRLVSKFGAR NWSMIARGMP GRSGKSCRLR WCNQLDPCVK RKPFTDEEDR IILAAHAVHG  120
NKWASIAKLL PGRTDNGIKN HWNSTLRRKS VNISGLKPAS SEETLLGGDM KSFKSSEGLD  180
VTMVANQPWQ SEDEVQATRN CCAPKQYLSS DSVTIDPSAG KNLPVVYPCA EENCPVVYTS  240
AEENNPMISC PAVKVGAFNV CNPSHNSAFS RAIPMQGPLI QASKPDFGIC KFLNGACGES  300
IIPMHCGRGC CAASSGVSSM SSLLGPEFLE YEEISPFPSQ ELSAIAMDLN NIAWIRSGLE  360
NAGRLSESAS HQRVPKGPST SMNSFEQNNE NDQFWFEEPN PFTTVTKDIV SQQMTMPTIA  420
LRAEVEGLS*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G55730.1	3e-85	MYB family protein