PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu013062.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family NF-YC
Protein Properties Length: 51aa    MW: 5474.39 Da    PI: 4.7657
Description NF-YC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu013062.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YC28.43.5e-091453074
        NF-YC 30 lkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtl 74
                 ++adedv +i+  +Pvl+ska elf+ +l  r++  + +   +t+
  Oeu013062.1  1 MQADEDVGKIAMAVPVLVSKALELFLQDLCDRTYDITVQRGAKTV 45
                 899******************************999888877776 PP
Sequence ? help Back to Top
Protein Sequence    Length: 51 aa     Download sequence    
MQADEDVGKI AMAVPVLVSK ALELFLQDLC DRTYDITVQR GAKTVSALHL *
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G12480.14e-26NF-YC family protein