PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu013344.2

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

bHLH

Protein Properties

Length: 393aa MW: 43648.8 Da PI: 6.144

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu013344.2	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	30	9.6e-10	242	290	3	55
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 ah+ +Er RR+ri +++ L++l+P + +k Ka +L + ++Y+ sLq Oeu013344.2 242 SAHSLAERIRRERISERMKVLQDLVPGC----DKITGKAIMLDEIINYVLSLQ 290 68***********************9....899***************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 393 aa Download sequence
MTMGSVLNDE LLVGEPVCSI GNPNSLVYLL QKEETQTSVA YCDQVNRSSY SDVPENRVWS 60 SENYIFQYQL DGDVVELEPK VADFGSGSVK NGGLFYQNNT PQIVDSVHPS NCSSAGRGHE 120 ARCRSLSTSC GSVQFQERFQ RHSLNLSPDD KKRKRFDDAS GLTPAENSDV KHVRNEIAEY 180 EDEDKLAHKS VAKSCSKIVG KRSIHKSNSK KAPNATICST NSTEDRNKDH VQVRAKRGEA 240 TSAHSLAERI RRERISERMK VLQDLVPGCD KITGKAIMLD EIINYVLSLQ HQVEFLSTKL 300 AAVDPRQKSG LDQFLLEDIH HSQEGIAATV DTIEMRSFYS LPDNVSPVTL PTLAPSSNFQ 360 ITRVWKEKIP DKSQMDIVCN LDPDSLKSEA DS*

Sequence ? help Back to Top

Protein Sequence Length: 393 aa Download sequence

MTMGSVLNDE LLVGEPVCSI GNPNSLVYLL QKEETQTSVA YCDQVNRSSY SDVPENRVWS  60
SENYIFQYQL DGDVVELEPK VADFGSGSVK NGGLFYQNNT PQIVDSVHPS NCSSAGRGHE  120
ARCRSLSTSC GSVQFQERFQ RHSLNLSPDD KKRKRFDDAS GLTPAENSDV KHVRNEIAEY  180
EDEDKLAHKS VAKSCSKIVG KRSIHKSNSK KAPNATICST NSTEDRNKDH VQVRAKRGEA  240
TSAHSLAERI RRERISERMK VLQDLVPGCD KITGKAIMLD EIINYVLSLQ HQVEFLSTKL  300
AAVDPRQKSG LDQFLLEDIH HSQEGIAATV DTIEMRSFYS LPDNVSPVTL PTLAPSSNFQ  360
ITRVWKEKIP DKSQMDIVCN LDPDSLKSEA DS*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G10120.1	2e-30	bHLH family protein