PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu013349.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

MYB

Protein Properties

Length: 472aa MW: 53267.4 Da PI: 4.9043

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu013349.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	46.6	7.9e-15	14	62	1	48
TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48 +g+W++eEd +l+ ++++ G+g +W + ++++g++R++k+c++rw++yl Oeu013349.1 14 KGPWSPEEDAKLKAYIEKRGTGgNWIALPQKIGLKRCGKSCRLRWLNYL 62 79*********************************************97 PP
2	Myb_DNA-binding	38.9	2.1e-12	69	111	2	46
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 g +T+eEd l+ + G++ W+ Ia+ ++ gRt++++k++w++ Oeu013349.1 69 GGFTEEEDNLICSLYISIGSR-WSIIAAQLP-GRTDNDIKNYWNT 111 569****************.*****.*********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 472 aa Download sequence
MGRAPCCEKA NVKKGPWSPE EDAKLKAYIE KRGTGGNWIA LPQKIGLKRC GKSCRLRWLN 60 YLRPNLRHGG FTEEEDNLIC SLYISIGSRW SIIAAQLPGR TDNDIKNYWN TRLQKKLLGK 120 QRKDQQARRG ISPKQEMKKG YENFSANECF SLYPFPPQSV VSPPFSVAYG TQTSTHIEDQ 180 ESFTGNLIVQ FGERFSYDHQ QQNNTGLINT STLHSSENTF SACTSLINST CPPLMSDYFA 240 INGVALDHFQ GTNSFPGELD EVVINGNINP LQLHGLDNFS TLMDMVTSNS TSQENCSWGD 300 ISFLDSSSIS SYEFCEQNFC AFDDQPRLIA MERRVERKEA AEREGNHVRL LEVVRNGSEN 360 QRQKLFDFFN FLPDLFWHFL AHGNFDVARE SESGDDVFGQ NVVGDETDPA VLSNFSLEQY 420 SESWTILPLD VRVPAAVFVL LWLLDDNKMK DEDRDKANVT LGSSSDPSEV Y*

Sequence ? help Back to Top

Protein Sequence Length: 472 aa Download sequence

MGRAPCCEKA NVKKGPWSPE EDAKLKAYIE KRGTGGNWIA LPQKIGLKRC GKSCRLRWLN  60
YLRPNLRHGG FTEEEDNLIC SLYISIGSRW SIIAAQLPGR TDNDIKNYWN TRLQKKLLGK  120
QRKDQQARRG ISPKQEMKKG YENFSANECF SLYPFPPQSV VSPPFSVAYG TQTSTHIEDQ  180
ESFTGNLIVQ FGERFSYDHQ QQNNTGLINT STLHSSENTF SACTSLINST CPPLMSDYFA  240
INGVALDHFQ GTNSFPGELD EVVINGNINP LQLHGLDNFS TLMDMVTSNS TSQENCSWGD  300
ISFLDSSSIS SYEFCEQNFC AFDDQPRLIA MERRVERKEA AEREGNHVRL LEVVRNGSEN  360
QRQKLFDFFN FLPDLFWHFL AHGNFDVARE SESGDDVFGQ NVVGDETDPA VLSNFSLEQY  420
SESWTILPLD VRVPAAVFVL LWLLDDNKMK DEDRDKANVT LGSSSDPSEV Y*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G49690.1	2e-74	MYB family protein