PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu013369.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

GRF

Protein Properties

Length: 370aa MW: 40687.1 Da PI: 7.1767

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu013369.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	76.5	2.6e-24	67	111	1	45
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkskee 45 d+ep+rCrRtDGKkWRCsr+v +++k+CErH h++r rsrk++e+ Oeu013369.1 67 DPEPWRCRRTDGKKWRCSRDVAPDQKYCERHAHKSRPRSRKPVET 111 79****************************************997 PP
2	QLQ	49.8	1.1e-17	8	43	2	37
QLQ 2 aFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiqk 37 FT +Q+q+L++Q ++yKy++a+ P+Pp+Ll+++++ Oeu013369.1 8 LFTGTQWQELERQTMIYKYILASIPIPPQLLLQLSN 43 6*******************************9975 PP

Sequence ? help Back to Top
Protein Sequence Length: 370 aa Download sequence
MIMSGKALFT GTQWQELERQ TMIYKYILAS IPIPPQLLLQ LSNAPILTHA FQSKTSGLDL 60 RFSSGSDPEP WRCRRTDGKK WRCSRDVAPD QKYCERHAHK SRPRSRKPVE TQSLNTTTNN 120 YSQQSLLLPP NTTTQNSMDF ANPYDQTRCT EWLMGSVSSS GTIPVSTCNQ QWHQLMQSSS 180 KVEYLNRDNT VQNENNVSTF QYDDKQDFMN LFLDHPKLAY LQGNLDLNTE KTQTTRRFID 240 ERSTGEKDGD EGSAASLNKK MFSPSSLTLS MSRGIGIGDD NDHNAAIGIG TMKTVKENDG 300 FLNSVSWMNS PQGGPLGEAL GLGNSTAGGG GKGCSDLASP HGYSNSTANS SNCSKSSCED 360 GSYAHNFIG*

Sequence ? help Back to Top

Protein Sequence Length: 370 aa Download sequence

MIMSGKALFT GTQWQELERQ TMIYKYILAS IPIPPQLLLQ LSNAPILTHA FQSKTSGLDL  60
RFSSGSDPEP WRCRRTDGKK WRCSRDVAPD QKYCERHAHK SRPRSRKPVE TQSLNTTTNN  120
YSQQSLLLPP NTTTQNSMDF ANPYDQTRCT EWLMGSVSSS GTIPVSTCNQ QWHQLMQSSS  180
KVEYLNRDNT VQNENNVSTF QYDDKQDFMN LFLDHPKLAY LQGNLDLNTE KTQTTRRFID  240
ERSTGEKDGD EGSAASLNKK MFSPSSLTLS MSRGIGIGDD NDHNAAIGIG TMKTVKENDG  300
FLNSVSWMNS PQGGPLGEAL GLGNSTAGGG GKGCSDLASP HGYSNSTANS SNCSKSSCED  360
GSYAHNFIG*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G24150.1	9e-29	GRF family protein