PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu013380.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

HD-ZIP

Protein Properties

Length: 203aa MW: 23399.1 Da PI: 5.4106

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu013380.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	66.4	3.9e-21	11	65	2	56
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 ++R++f++eq++ Le+ Fe ++ p +++++LAkklgL+ rqV +WFqNrRa+ k Oeu013380.1 11 SSRQRFSDEQIKSLETTFEVESRPELRMKQHLAKKLGLQPRQVAIWFQNRRARSK 65 58***************************************************99 PP
2	HD-ZIP_I/II	106.1	2.8e-34	13	103	3	93
HD-ZIP_I/II 3 krrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93 ++r+s+eq+k+LE++Fe e++ e + K++la++Lglqprqva+WFqnrRAR k k+lE+dy++Lk+ yd+l+++ e+++ke+++L +l++ Oeu013380.1 13 RQRFSDEQIKSLETTFEVESRPELRMKQHLAKKLGLQPRQVAIWFQNRRARSKPKELERDYNVLKADYDKLVSQFESMKKENQALLIQLQK 103 78***********************************************************************************999986 PP

Sequence ? help Back to Top
Protein Sequence Length: 203 aa Download sequence
MSNINKASKN SSRQRFSDEQ IKSLETTFEV ESRPELRMKQ HLAKKLGLQP RQVAIWFQNR 60 RARSKPKELE RDYNVLKADY DKLVSQFESM KKENQALLIQ LQKLKQAEGR SDEQFGNENM 120 KIETLEQTRF LLENDSPELG VPLCNDFSRK VDYLWDDADD HPELVQMADG YLTSTDNIHS 180 FESSCLMDNS SHSGNGGQAF NF*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G46680.2	8e-33	HD-ZIP family protein