PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu013491.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family C2H2
Protein Properties Length: 192aa    MW: 21484.1 Da    PI: 7.3742
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu013491.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H216.42.6e-05526223
                 EETTTTEEESSHHHHHHHHHHT CS
      zf-C2H2  2 kCpdCgksFsrksnLkrHirtH 23
                 +C++C ksFs+   L  H+r+H
  Oeu013491.1  5 QCKICFKSFSNGKALGGHMRSH 26
                 7********************9 PP
2zf-C2H217.11.5e-05166188123
                  EEETTTTEEESSHHHHHHHHHHT CS
      zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                  y+C+ C k+F+++  L +H  +H
  Oeu013491.1 166 YQCETCEKVFKSSQGLGSHRTSH 188
                  9******************9988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 192 aa     Download sequence    
MEGQQCKICF KSFSNGKALG GHMRSHYATL PLPPKTPQRQ ELGGDTESTT CSLFSVLEDV  60
EEKLPKSLRV VDPEFLDDAG SVVIQDKVTE PESTRKRYRV RRSSKEVIKK RNTGSSTESL  120
AELEMVSRRS CVSEEEEEGA WSLIMLSRDG WSSNDSVESQ LSEKKYQCET CEKVFKSSQG  180
LGSHRTSHKT R*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
195111RKRYRVRRSSKEVIKKR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G02030.13e-22C2H2 family protein