PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu013538.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family MYB
Protein Properties Length: 311aa    MW: 35236.4 Da    PI: 6.7551
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu013538.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding46.86.7e-151462148
                     TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48
                     +g+W++eEd +l+  ++++G+g +W + +++ g++R++k+c++rw++yl
      Oeu013538.1 14 KGPWSPEEDAQLKVFIEEYGTGgNWIALPQKAGLKRCGKSCRLRWLNYL 62
                     79*********************************************97 PP
2Myb_DNA-binding43.28.8e-1469111246
                      SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding   2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                      g +++eEd ++ ++ +  G++ W+ Ia+ ++ gRt++++k++w++
      Oeu013538.1  69 GEFSEEEDRIICNLYATIGSR-WSIIAAQLP-GRTDNDIKNHWNT 111
                      78*******************.*********.***********97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 311 aa     Download sequence    
MGRAPCCDKA NVKKGPWSPE EDAQLKVFIE EYGTGGNWIA LPQKAGLKRC GKSCRLRWLN  60
YLRPNIKHGE FSEEEDRIIC NLYATIGSRW SIIAAQLPGR TDNDIKNHWN TKLKKKLINK  120
FTPNYQGKTS PFSPTLSQSV PPNLSSLYKD HFNSFYTSTK SLSGFESSSP PQNFLYYNTA  180
IPSFTNQYSY YLQNQDGLMD SQYYYPVKDQ NMIMFNGNEV SCSSSDGSCS QISYSKDVKQ  240
EEMGCFQGFM LDYGNIHGDY PLNTFSDDHQ KGSGILGNCQ LQYDLEEVKE IISTGHGCSN  300
NNMFFLNYEN *
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G65790.19e-78MYB family protein