PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu013555.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family MYB
Protein Properties Length: 257aa    MW: 28936.8 Da    PI: 7.8571
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu013555.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding56.85.2e-181461148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     rg+W+teEd ll+++++++G g+W++ +++ g+ R++k+c++rw +yl
      Oeu013555.1 14 RGPWSTEEDTLLANYIQEHGEGHWRSLPQKAGLLRCGKSCRLRWMNYL 61
                     89******************************99************97 PP
2Myb_DNA-binding53.45.9e-1767112148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                      rg+ +++E++l+++++ +lG++ W++Ia +++ gRt++++k++w+++l
      Oeu013555.1  67 RGNISPDEEDLIIRLHSLLGNR-WSLIAGRLP-GRTDNEIKNHWNTHL 112
                      7899******************.*********.************996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 257 aa     Download sequence    
MGRSPCCSKV GLKRGPWSTE EDTLLANYIQ EHGEGHWRSL PQKAGLLRCG KSCRLRWMNY  60
LRPGIKRGNI SPDEEDLIIR LHSLLGNRWS LIAGRLPGRT DNEIKNHWNT HLLKKLNNAG  120
IQPKPHKDLP KPKKSTPPAS KKKTKTEVEK AAPKTTVYLP KPIRFSSVNG CDSLVVSGSG  180
SSSNEGDNNV EKESAILEVS YVPCPLFELD EDENYDRVGV YGDDQDFLNL PLIHHSDFYD  240
DVNMLEKVYD EYLQLL*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G13540.12e-64MYB family protein