PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu013585.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

HD-ZIP

Protein Properties

Length: 354aa MW: 38715.9 Da PI: 6.4065

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu013585.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	57.4	2.5e-18	188	242	2	56
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 rk+ +++keq Lee F+++++++ +++ LAk+l+L rqV vWFqNrRa+ k Oeu013585.1 188 RKKLRLSKEQAASLEESFKEHSTLNPKQKLALAKQLNLRPRQVEVWFQNRRARTK 242 778899***********************************************98 PP
2	HD-ZIP_I/II	126.1	1.6e-40	188	275	1	88
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLr 88 +kk+rlskeq+++LEesF+e+++L+p++K +la++L+l+prqv+vWFqnrRARtk+kq+E+d+e+Lkr++++l+een++L+ke +eLr Oeu013585.1 188 RKKLRLSKEQAASLEESFKEHSTLNPKQKLALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCETLTEENRKLHKELQELR 275 69*************************************************************************************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 354 aa Download sequence
MELGLSLGDA SKPVGFLTKN GDSEKHKKNG FGFFVELGLN TNGGNQELAE KSHENDGGDD 60 DQTSEDTRAN MENTPIQLDL LPRSSVPCQT PSQIQPRPWS SDNGSSENGS ISGNVGLVAV 120 VRDLEVNRLP AAATEEASSA NSVGSPLQMN FGIYVNTGNG NLGANDVVET ERVSSRASDD 180 DENCSNTRKK LRLSKEQAAS LEESFKEHST LNPKQKLALA KQLNLRPRQV EVWFQNRRAR 240 TKLKQTEVDC EYLKRCCETL TEENRKLHKE LQELRVLKTS NPFYTQLPAT TLTMCPSCER 300 VASTSTAAPA TTTTASIDST TKPINPFPLT RPRFYPFSQT PPPAHQHHQS AAS*

Sequence ? help Back to Top

Protein Sequence Length: 354 aa Download sequence

MELGLSLGDA SKPVGFLTKN GDSEKHKKNG FGFFVELGLN TNGGNQELAE KSHENDGGDD  60
DQTSEDTRAN MENTPIQLDL LPRSSVPCQT PSQIQPRPWS SDNGSSENGS ISGNVGLVAV  120
VRDLEVNRLP AAATEEASSA NSVGSPLQMN FGIYVNTGNG NLGANDVVET ERVSSRASDD  180
DENCSNTRKK LRLSKEQAAS LEESFKEHST LNPKQKLALA KQLNLRPRQV EVWFQNRRAR  240
TKLKQTEVDC EYLKRCCETL TEENRKLHKE LQELRVLKTS NPFYTQLPAT TLTMCPSCER  300
VASTSTAAPA TTTTASIDST TKPINPFPLT RPRFYPFSQT PPPAHQHHQS AAS*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	187	193	TRKKLRL
2	237	245	RRARTKLKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G06710.1	3e-63	HD-ZIP family protein