PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu013657.2

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

ARF

Protein Properties

Length: 1450aa MW: 162487 Da PI: 6.5119

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu013657.2	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	73.6	2.4e-23	337	438	1	99
EEEE-..-HHHHTT-EE--HHH.HTT......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE.. CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefel 92 f+k+lt sd++++g +++ +++a+e+ + +++ +++l+ +d +g++W++++i+r++++r++l++GW+ Fv++++L +gD ++F + +++el Oeu013657.2 337 FCKTLTASDTSSHGGFSVLRRHADEClppldmS-QQPPTQELVAKDMHGNEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFL--RGENGEL 431 99***************************63.4445569*********************************************..449999 PP EEEEE-S CS B3 93 vvkvfrk 99 +v+v+r+ Oeu013657.2 432 RVGVRRA 438 ****996 PP
2	Auxin_resp	117.7	9.9e-39	463	545	1	83
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 a+ha +tk++F+v+Y+Pr+s++e++v+++++++++k+++++GmRfkm+fe+e+++e+r++Gt+vg++d+dp rWp+SkWr+Lk Oeu013657.2 463 AWHANQTKTMFTVYYKPRTSPAEYIVSYDQYMESMKINYAIGMRFKMRFEGEEAPEQRFTGTIVGIEDADPKRWPESKWRCLK 545 79*******************************************************************************96 PP
3	Auxin_resp	117.7	9.9e-39	891	973	1	83
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 a+ha +tk++F+v+Y+Pr+s++e++v+++++++++k+++++GmRfkm+fe+e+++e+r++Gt+vg++d+dp rWp+SkWr+Lk Oeu013657.2 891 AWHANQTKTMFTVYYKPRTSPAEYIVSYDQYMESMKINYAIGMRFKMRFEGEEAPEQRFTGTIVGIEDADPKRWPESKWRCLK 973 79*******************************************************************************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 1450 aa Download sequence
MATSEMSIDG GSQSLMPEKI TGAGNVDAET ALYTELWRAC AGPLVTVPRE QDLVFYFPQG 60 HLEEVEAATS QSADQQMPVY NLPPKILCRV ANVLLKAEPD TDEVFAQVTL MPETNQDENA 120 VKKETLPPSS PCCRVHSFCK TLTASDTSSH GGFSVLRRHA DECLPPLDMS QQPPTQELVA 180 KDMHGNEWRF RHIFRGGKQM ATSEMSIDRG SQSLMPEKIT DAGNVDAETA LYTELWRACA 240 GPLVTVPREQ DLVFYFPQGH LEEVEAATSQ SADQQMPVYN LPPKILCRVA NVLLKAEPDT 300 DEVFAQVTLM PETNQDENAV KKETLSPSPP CCRVHSFCKT LTASDTSSHG GFSVLRRHAD 360 ECLPPLDMSQ QPPTQELVAK DMHGNEWRFR HIFRGQPRRH LLQSGWSVFV SSKRLVAGDA 420 FIFLRGENGE LRVGVRRAMR KEGNVPSSVI SSHNMHLGVL ATAWHANQTK TMFTVYYKPR 480 TSPAEYIVSY DQYMESMKIN YAIGMRFKMR FEGEEAPEQR FTGTIVGIED ADPKRWPESK 540 WRCLKVRWDE TSSIPRPERV SPWEIEPAAL NPLPVSRPKR PRSNIFPSSP DSSVCTREAS 600 SKITVDSSAA SGFPRVLQDQ EFSPLRSTFL ENYESDSSEK QILWRPSLDD EKVDVSTTRR 660 YGSDKRFPLG RQESSVTNLL SGFGTQINSS HDFYMPCGDH AGAIANHLML EDEGKFNSIG 720 NTRSKIHSGL SLNLMDSNMK THGQEDMRYG GFRLCSVLPD HRAKNLPSDW LMPPPISPYL 780 QTPPAMSREL ALKSSSQQQY NGRKPKAGNC KLFGISLNSS SIPIEPALSE WLECLCEFQE 840 ACCWGCLHIS KVWAENGELR VGVRRAMRQE GNVPSSVISS HSMHLGVLAT AWHANQTKTM 900 FTVYYKPRTS PAEYIVSYDQ YMESMKINYA IGMRFKMRFE GEEAPEQRFT GTIVGIEDAD 960 PKRWPESKWR CLKVRWDETS SIPRPERVSP WEIEPAALNP LPVSRPKRPR SNILPSSPDS 1020 SVCTREASSK ITVDSSAASG FPRVLQEQEF SPLRSTFLEN HESDSSEKQI LWRPSLDDEK 1080 VDFSTTRRYG SDKRFPLGRQ ESTVTNLSSG FGTQINSSHD FYMPRGDHAG AIANRLMLEH 1140 EGKFNSIRNT RSKIHSGLSL NLMDSNMKTH GQEDMRYGGF RQYSVLPDHR AKNLPSDWLM 1200 PPPISPYLQT LPAMSRELAL KSASQPQYNG RKPKEGNCKL FGISLNSSSI PMEPALPHRN 1260 ASIELADRML LGVNSHKSTA LESHQNSKLV DNQVANSEQE KQCRTYVPIS SNGEGKGHSG 1320 STRSCTKVHK QGIALGRSVD LANFNNYNEL IAALDDLFKC NGELTSQNKN WLVVYTDDED 1380 DMMLVGDDPW DEFCGMVRKI LICTKEEVQR MNPGTFISNG EDYSSVPEGL DANEARDLRR 1440 PSTSSPDDC*

Sequence ? help Back to Top

Protein Sequence Length: 1450 aa Download sequence

MATSEMSIDG GSQSLMPEKI TGAGNVDAET ALYTELWRAC AGPLVTVPRE QDLVFYFPQG  60
HLEEVEAATS QSADQQMPVY NLPPKILCRV ANVLLKAEPD TDEVFAQVTL MPETNQDENA  120
VKKETLPPSS PCCRVHSFCK TLTASDTSSH GGFSVLRRHA DECLPPLDMS QQPPTQELVA  180
KDMHGNEWRF RHIFRGGKQM ATSEMSIDRG SQSLMPEKIT DAGNVDAETA LYTELWRACA  240
GPLVTVPREQ DLVFYFPQGH LEEVEAATSQ SADQQMPVYN LPPKILCRVA NVLLKAEPDT  300
DEVFAQVTLM PETNQDENAV KKETLSPSPP CCRVHSFCKT LTASDTSSHG GFSVLRRHAD  360
ECLPPLDMSQ QPPTQELVAK DMHGNEWRFR HIFRGQPRRH LLQSGWSVFV SSKRLVAGDA  420
FIFLRGENGE LRVGVRRAMR KEGNVPSSVI SSHNMHLGVL ATAWHANQTK TMFTVYYKPR  480
TSPAEYIVSY DQYMESMKIN YAIGMRFKMR FEGEEAPEQR FTGTIVGIED ADPKRWPESK  540
WRCLKVRWDE TSSIPRPERV SPWEIEPAAL NPLPVSRPKR PRSNIFPSSP DSSVCTREAS  600
SKITVDSSAA SGFPRVLQDQ EFSPLRSTFL ENYESDSSEK QILWRPSLDD EKVDVSTTRR  660
YGSDKRFPLG RQESSVTNLL SGFGTQINSS HDFYMPCGDH AGAIANHLML EDEGKFNSIG  720
NTRSKIHSGL SLNLMDSNMK THGQEDMRYG GFRLCSVLPD HRAKNLPSDW LMPPPISPYL  780
QTPPAMSREL ALKSSSQQQY NGRKPKAGNC KLFGISLNSS SIPIEPALSE WLECLCEFQE  840
ACCWGCLHIS KVWAENGELR VGVRRAMRQE GNVPSSVISS HSMHLGVLAT AWHANQTKTM  900
FTVYYKPRTS PAEYIVSYDQ YMESMKINYA IGMRFKMRFE GEEAPEQRFT GTIVGIEDAD  960
PKRWPESKWR CLKVRWDETS SIPRPERVSP WEIEPAALNP LPVSRPKRPR SNILPSSPDS  1020
SVCTREASSK ITVDSSAASG FPRVLQEQEF SPLRSTFLEN HESDSSEKQI LWRPSLDDEK  1080
VDFSTTRRYG SDKRFPLGRQ ESTVTNLSSG FGTQINSSHD FYMPRGDHAG AIANRLMLEH  1140
EGKFNSIRNT RSKIHSGLSL NLMDSNMKTH GQEDMRYGGF RQYSVLPDHR AKNLPSDWLM  1200
PPPISPYLQT LPAMSRELAL KSASQPQYNG RKPKEGNCKL FGISLNSSSI PMEPALPHRN  1260
ASIELADRML LGVNSHKSTA LESHQNSKLV DNQVANSEQE KQCRTYVPIS SNGEGKGHSG  1320
STRSCTKVHK QGIALGRSVD LANFNNYNEL IAALDDLFKC NGELTSQNKN WLVVYTDDED  1380
DMMLVGDDPW DEFCGMVRKI LICTKEEVQR MNPGTFISNG EDYSSVPEGL DANEARDLRR  1440
PSTSSPDDC*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G62000.3	0.0	ARF family protein