PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu013658.5

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

Trihelix

Protein Properties

Length: 359aa MW: 41150.7 Da PI: 6.3358

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu013658.5	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	68.8	1.1e-21	40	133	1	85
trihelix 1 rWtkqevlaLiearremeerlrrgk.........lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdql 85 rW +qe+l Lie+++ e+r +g+ + +p+W++vs+++r+rg++r+p+qC+++w+nl +++kik +e++ + ++s + + ++l Oeu013658.5 40 RWRRQETLFLIEGKKVAEDRGLKGRrsssifgsdQYEPKWDSVSSYCRQRGVNRGPVQCRKRWSNLVCDFRKIKMWESRVKGVNESFWTMRSDL 133 8************9999998875556677777******************************************9877777777777766 PP

Sequence ? help Back to Top
Protein Sequence Length: 359 aa Download sequence
MASEPSGVHE NGTSSTCVEN GQPLSTERTD YKNKIVRHPR WRRQETLFLI EGKKVAEDRG 60 LKGRRSSSIF GSDQYEPKWD SVSSYCRQRG VNRGPVQCRK RWSNLVCDFR KIKMWESRVK 120 GVNESFWTMR SDLRRDRRLP GFFDREVYDV LDGKTFTDDA YRLALVPVSP DENNGYSIDG 180 VEAEDEDEMV EDEEGEAVFH GKHHSIPEDR IFPEFEQVAQ DEIGESQGNE KATKDDRTKP 240 IPSPVPISEK KYQPHHEAYS NRGTERGKRP QPNFETGSTM FQEGVTRRRF SSDGCQIIDA 300 TDRLIRVLQS NAILLNAQLE AQNMNRQVDR EQRNDQHNSL VIALNKITDA LAKIADKL*

Sequence ? help Back to Top

Protein Sequence Length: 359 aa Download sequence

MASEPSGVHE NGTSSTCVEN GQPLSTERTD YKNKIVRHPR WRRQETLFLI EGKKVAEDRG  60
LKGRRSSSIF GSDQYEPKWD SVSSYCRQRG VNRGPVQCRK RWSNLVCDFR KIKMWESRVK  120
GVNESFWTMR SDLRRDRRLP GFFDREVYDV LDGKTFTDDA YRLALVPVSP DENNGYSIDG  180
VEAEDEDEMV EDEEGEAVFH GKHHSIPEDR IFPEFEQVAQ DEIGESQGNE KATKDDRTKP  240
IPSPVPISEK KYQPHHEAYS NRGTERGKRP QPNFETGSTM FQEGVTRRRF SSDGCQIIDA  300
TDRLIRVLQS NAILLNAQLE AQNMNRQVDR EQRNDQHNSL VIALNKITDA LAKIADKL*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G33550.1	6e-71	Trihelix family protein